Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte17g01329 ATGCAGGGTGTGCATTCTATCGGTGGAGGCAGATTCTTCGATAGTGGCGGTGGGAGTACGGATGGAGATAGGAGGCTGATGCCTTACCCACCTCAGAACCATCAGGCTCTCAAGTGTCCTAGGTGTGATTCCCTGAACACGAAATTCTGCTATTACAACAACTACAACCTTTCACAGCCGCGTCATTTTTGCAAGAATTGCCGTCGTTACTGGACCAAAGGCGGTGTTCTCCGTAACGTGCCTGTGGGAGGCGGCTGCCGGAAATCAAAGCGGTCGAGGGATAGGAAGTTGTCTTCAGAAACCATGACGAGTTCACCACCTCCTGCATCTGCTACAGAGATAGAAACACCAGATCCTACTTCATCCCAGAAGAAGCTTAAATCAAATTCTCATTCCAGTAGCGAAAGTTCTAGCCTTACTGCAGCGAATACAGCGTCCGCTTCTACAGAAGCCATGTCCGCACCAACGCCAAACACGGGGACGAATAATTTGGTTAGCATGCAAGAGTCGAAGTTCTATATGAACAATCAAAGCTGGATGACCCAAATTGAAGCGGGTCTGCTGGAACAAGGAACAGAGTCTGGGATTTTCTCAGAGATTGGGAGCCTCACTGGCTTGATTCCCTCGACCACCGAAGCATTGCCTTTTGGTTTTGGCAATATATCTGATATGTTGTCGTTTCGTTTTTGTCCACAAAGTAATGAGCATTTGGGACAGAGTGGTAGCCAGCATGATCAGTGGCAGCAACAGCAGAAGTGGATGGTGAGTAATAGCATGGGTGATCATCATTCTCTGAGTTTGAAGTTGCCAGAAATCTCAGGCGGGTCGTCTATACTTGATCAGACGGTTCAAGTTGATTTCTCATCTCTGCAGGGCGTTGGAGATCAAGGTTTGTTCGATCTTCCTAACACAGTTGATCAGACTTCCTGGAGTCAGAGTCATTGGACTTAA 951 0.4774 MQGVHSIGGGRFFDSGGGSTDGDRRLMPYPPQNHQALKCPRCDSLNTKFCYYNNYNLSQPRHFCKNCRRYWTKGGVLRNVPVGGGCRKSKRSRDRKLSSETMTSSPPPASATEIETPDPTSSQKKLKSNSHSSSESSSLTAANTASASTEAMSAPTPNTGTNNLVSMQESKFYMNNQSWMTQIEAGLLEQGTESGIFSEIGSLTGLIPSTTEALPFGFGNISDMLSFRFCPQSNEHLGQSGSQHDQWQQQQKWMVSNSMGDHHSLSLKLPEISGGSSILDQTVQVDFSSLQGVGDQGLFDLPNTVDQTSWSQSHWT* 317
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte17g01329 316 MobiDBLite consensus disorder prediction 99 163 - -
Pte17g01329 316 PANTHER DOF ZINC FINGER PROTEIN DOF1.4-RELATED 30 232 IPR045174 GO:0003700|GO:0006355
Pte17g01329 316 Pfam Dof domain, zinc finger 35 91 IPR003851 GO:0003677|GO:0006355
Pte17g01329 316 MobiDBLite consensus disorder prediction 1 29 - -
Pte17g01329 316 MobiDBLite consensus disorder prediction 81 163 - -
Pte17g01329 316 ProSitePatterns Zinc finger Dof-type signature. 39 75 IPR003851 GO:0003677|GO:0006355
Pte17g01329 316 ProSiteProfiles Zinc finger Dof-type profile. 37 91 IPR003851 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte17g01329 Pte-Chr17 28080268 28081490 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte17g01329 23 316 C2C2-Dof Transcription Factor Family AT5G60850 42.140 9.47e-54 176
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2C2-Dof Pte17g01329 zf-Dof 3.3e-33 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte17g01329 - - qsa:O6P43_002258 302.753