Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte17g01325 ATGATATCTATCCTCATTTCTTATTTTTCACCTGCCTGGACTATTCTTCTGGGTCAGAAACCGGAAGGAGAGAAAATGGGAAAGTCAACACATTCAGAGAAATTCTCTATAGATTTTGTGATGGGAGGAGCAGCAGCATTTATAGCAAAGACTACAGCTGCTCCAATAGAGAGGGTGAAGCTTTTACTGCAAAACCAAGGAGAGATGATAAAGAGAGGACAACTTGTAAGACCCTATCTAGGAGTGGCTAATTGCTTCAAAAGGATCTTTAGGGAGGAAGGCATCCTGGCTTTTTGGAGAGGTCACCAGGCTAATGTGATACGATATTTCCCAACACAGGCTTTCAACTTTGCATTTAAGGGTTACTACAAAAGCATTTTTGGGCGTTCAAAAGAGAGAGATGGATATGTTAAGTGGTTTGCCGGAAATGTGGCTTCAGGGTGCGCTGCAGGAGCAACTACTTCAATCTTTCTTTATCATCTAGATTATGCCCGTACACGATTAGGAACTGATGCGAAGGAATGTCATACCAATAGTCAGCGCCAATTCAAGGGGTTAGCTGACGTATACCGCAAAACATTATCAAGTGATGGAATAGTTGGCCTGTACAGGGGATTCAGCGTTTCAATTATGGGAATCACTCTGTACCGAGGAATGTACTTTGGCATATATGACACCGTGAAGCCCATTGTTTTAGTTGGACCACTTGATGGGAATTTTATCGCCAGTTTCTTAGTTGGATGGAGTGTCACAACAGTCTCTGGGGTTTGTGCCTATCCCTTCGATACACTGCGACGCAGAATGATGTTAACATCGGGACATCCAGTAAAGTATCGTAATGCTGTACATGCATTTCGTGAGATTGTTCGACATGAGGGTTTCACTGCCCTATATCGTGGAGTTACTGCAAATATGCTTCTTGGGGTGGCTGGTGCTGGTGTACTTGCAGGATATGATAAGCTTCACCAGATTGCATTCGAGCGCAGTTACTCATATCAATCACAACAGAGAGTTGTGAAGTGA 1023 0.433 MISILISYFSPAWTILLGQKPEGEKMGKSTHSEKFSIDFVMGGAAAFIAKTTAAPIERVKLLLQNQGEMIKRGQLVRPYLGVANCFKRIFREEGILAFWRGHQANVIRYFPTQAFNFAFKGYYKSIFGRSKERDGYVKWFAGNVASGCAAGATTSIFLYHLDYARTRLGTDAKECHTNSQRQFKGLADVYRKTLSSDGIVGLYRGFSVSIMGITLYRGMYFGIYDTVKPIVLVGPLDGNFIASFLVGWSVTTVSGVCAYPFDTLRRRMMLTSGHPVKYRNAVHAFREIVRHEGFTALYRGVTANMLLGVAGAGVLAGYDKLHQIAFERSYSYQSQQRVVK* 341
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte17g01325 340 SUPERFAMILY Mitochondrial carrier 34 320 IPR023395 -
Pte17g01325 340 PRINTS Mitochondrial carrier protein signature 38 51 IPR002067 GO:0055085
Pte17g01325 340 PRINTS Mitochondrial carrier protein signature 247 269 IPR002067 GO:0055085
Pte17g01325 340 PRINTS Mitochondrial carrier protein signature 51 65 IPR002067 GO:0055085
Pte17g01325 340 PRINTS Mitochondrial carrier protein signature 203 221 IPR002067 GO:0055085
Pte17g01325 340 PRINTS Mitochondrial carrier protein signature 101 121 IPR002067 GO:0055085
Pte17g01325 340 PRINTS Mitochondrial carrier protein signature 153 171 IPR002067 GO:0055085
Pte17g01325 340 ProSiteProfiles Solute carrier (Solcar) repeat profile. 138 230 IPR018108 -
Pte17g01325 340 ProSiteProfiles Solute carrier (Solcar) repeat profile. 33 126 IPR018108 -
Pte17g01325 340 PANTHER ADP,ATP CARRIER PROTEIN 1-RELATED-RELATED 30 334 IPR002113 GO:0005471|GO:0005743|GO:0140021|GO:1990544
Pte17g01325 340 FunFam ADP,ATP carrier protein ER-ANT1 36 330 - -
Pte17g01325 340 Gene3D Mitochondrial carrier domain 28 331 IPR023395 -
Pte17g01325 340 ProSiteProfiles Solute carrier (Solcar) repeat profile. 238 324 IPR018108 -
Pte17g01325 340 Pfam Mitochondrial carrier protein 34 129 IPR018108 -
Pte17g01325 340 Pfam Mitochondrial carrier protein 139 230 IPR018108 -
Pte17g01325 340 Pfam Mitochondrial carrier protein 239 324 IPR018108 -
Pte17g01325 340 PRINTS Adenine nucleotide translocator signature 79 100 IPR002113 GO:0005471|GO:0005743|GO:0140021|GO:1990544
Pte17g01325 340 PRINTS Adenine nucleotide translocator signature 35 47 IPR002113 GO:0005471|GO:0005743|GO:0140021|GO:1990544
Pte17g01325 340 PRINTS Adenine nucleotide translocator signature 243 259 IPR002113 GO:0005471|GO:0005743|GO:0140021|GO:1990544
Pte17g01325 340 PRINTS Adenine nucleotide translocator signature 138 151 IPR002113 GO:0005471|GO:0005743|GO:0140021|GO:1990544
Pte17g01325 340 PRINTS Adenine nucleotide translocator signature 112 124 IPR002113 GO:0005471|GO:0005743|GO:0140021|GO:1990544
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte17g01325 Pte-Chr17 28048851 28051222 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte17g01325 32 327 Antiporters AT5G17400 80.743 7.39e-179 496
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte17g01325 K05863 - cave:132184861 521.931