LGRPv2

Show entries

Search:

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Pte17g01323	ATGGGGAGAGGAAGGGTGCAGTTGAAGAGGATCGAGAACAAGATCAACAGGCAAGTGACTTTCTCTAAGAGGAGGTCAGGGTTGCTCAAAAAAGCTCATGAGATTTCCGTACTTTGTGATGCTGAGGTAGCTTTGATTGTCTTCTCCACTAAAGGCAAGCTCTCTGAGTATTCTAGTGATTCCTGCATGGAGAGAATTCTTGAACGTTATGAGAGGTACTCACATGCAGAGAGGCAGCTGCTTGTCAGTCCCCCAGAATTAGATGGAAACTGGATGTTGGAATATGCAAAGCTCAAAGCTAGGACGGAGGTCTTGCAAAGAAACCAAAGGCATTTCAAAGGAGAAGATCTTCATGGTCTCAGTCTCAAAGAGCTTCAGAATTTGGAACACCAGCTTGAGTCTGCACTCAAGCAGATACGATCGAAGAAGAACCAACTGGTGTATGAATCAATAGCTAACATTCAGAAAAAGGATAAGGCGTTGCAGGAGCAAAACAACATTCTGGCAAAGAAGGTGAACGAGAAAGAGAAGGAATTGGCTCAACTGGCACAATGGGAGCAGCAAAATCATGCAATGGAGAAATCCTCAGTTCCACCACAACAATTTCAGTCCTTGAGTATTGGGTTTGACTCTGTTCTCTTCTCTTCCACTCCATCTCAACTTGTATATTATGTCGCTAGATTAATGGCAGGCTTTTGA	699	0.4378	MGRGRVQLKRIENKINRQVTFSKRRSGLLKKAHEISVLCDAEVALIVFSTKGKLSEYSSDSCMERILERYERYSHAERQLLVSPPELDGNWMLEYAKLKARTEVLQRNQRHFKGEDLHGLSLKELQNLEHQLESALKQIRSKKNQLVYESIANIQKKDKALQEQNNILAKKVNEKEKELAQLAQWEQQNHAMEKSSVPPQQFQSLSIGFDSVLFSSTPSQLVYYVARLMAGF*	233

Showing 1 to 1 of 1 entries

Show entries

Search:

Seq ID	Length	Analysis	Description	Start	End	IPR	GO
Pte17g01323	232	ProSiteProfiles	K-box domain profile.	88	178	IPR002487	GO:0003700\|GO:0005634\|GO:0006355
Pte17g01323	232	PRINTS	MADS domain signature	3	23	IPR002100	GO:0003677\|GO:0046983
Pte17g01323	232	PRINTS	MADS domain signature	38	59	IPR002100	GO:0003677\|GO:0046983
Pte17g01323	232	PRINTS	MADS domain signature	23	38	IPR002100	GO:0003677\|GO:0046983
Pte17g01323	232	Coils	Coil	122	145	-	-
Pte17g01323	232	Pfam	SRF-type transcription factor (DNA-binding and dimerisation domain)	10	57	IPR002100	GO:0003677\|GO:0046983
Pte17g01323	232	PANTHER	SERUM RESPONSE FACTOR HOMOLOG	3	180	-	-
Pte17g01323	232	FunFam	MADS-box transcription factor MADS-MC	13	85	-	-
Pte17g01323	232	CDD	MADS_MEF2_like	2	79	IPR033896	GO:0000977\|GO:0045944
Pte17g01323	232	Pfam	K-box region	90	172	IPR002487	GO:0003700\|GO:0005634\|GO:0006355

Showing 1 to 10 of 17 entries

Show entries

Search:

Select	Gene	Chromosome	Start	End	Duplicated_type
	Pte17g01323	Pte-Chr17	28043971	28045887	Tandem

Showing 1 to 1 of 1 entries

Show entries

Search:

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Pte17g01323	1	203	MADS-box Gene Family	AT1G26310	63.285	1.97e-86	255

Showing 1 to 1 of 1 entries

Show entries

Search:

Select	Regulatory Factors	Family	Gene	Hmm_acc	Hmm_name	E_value	Clan
	TF	MADS-MIKC	Pte17g01323		ALMT	8.7e-06	CL0307

Showing 1 to 1 of 1 entries

Show entries

Search:

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Pte17g01323	K09264		-	cave:132175414	325.865

Showing 1 to 1 of 1 entries