Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte17g01320 ATGGGGGTCCTTTCCGCTGGATCCATTGCCAAGCATAGCGCCCTCACTGCTTTGCTTATTTTCTTCATATCTTGCTGCAGTTTCACTCATACAGAGGCCTTCGATTCACTGGATCCCTCTGCAAATATAACTATCAAATGGGATATTATGAGTTGGACACCAGACGGCTATGTAGCTGTTGTGACAATGTTCAACTTTCAACAGTATCGTCATATTCAGGCACCAGGTTGGACATTAGGGTGGACATGGGCGAAAAAGGAAGTAATTTGGACCATGATGGGAGGCCAAACCACAGAGCAAGGAGACTGCTCAAAGTTCAAAGGGAATGTTCCACATTGTTGTAAGAAGACTCCTACAGTAGTTGATTTGTTGCCAGGAACTCCTTACAATCAACAGATTGCAAATTGTTGCAAAGGGGGAGTGCTTAACTCATGGGCACAAGATCCAACCACTGCTGCAAGTTCATTCCAGGTAAGTGTAGGCCAGGCAGGAACAAGTAATAAAACTGTCAAGTTGCCGAGGAACTTCACTCTCAAAGCACCAGGTCCTGGATACACTTGCGGTCCTGCAAAGATTGTGCCATCAACTAAATTTGTTACATCAGATAAAAGGAGAGTCACTCAAGCGTTGATGACCTGGAATGTAACCTGCCAATATTCTCAATTTCTGGCTCAAAAAACACCCACATGCTGTGTTTCTCTCTCATCCTTCTACAACGACACTGTGGTAGGCTGCCCAACTTGTGCATGCGGCTGCAGGAGCAACAAAAAAGATTCTGGGAACTGTGTAGAGGCAGATTCCCCGCACCTAGCTTCAGTAGTATCAGGTCCTGGCAAGTCTAGTGATACTAGTCCTCTAGTACAGTGTACCAGCCATATGTGTCCAATTCGAGTTCATTGGCATGTCAAGGTGAACTACAAAGAGTACTGGAGGGTGAAGATAACAATCACAAATTTCAATTACAGAATGAATTATTCACAGTGGAATCTCGTAGTCCAACATCCTAACTTCGACAACATAACCCAGCTTTTTAGCTTCAATTACAAGTCGTTAACTCCTTACGAAGGCCTGAATGATACTGCAATGTTGTGGGGTGTCAAGTTCTACAACGACTTCCTCAACGCAGCAGGACCTTATGGGAATGTGCAGTCAGAACTATTATTCCGAAAGGACCAATCAACCTTTACATTCGACAAGGGTTGGGCTTTCCCACGAAGGATTTATTTCAATGGTGATAACTGTGTCATGCCACCTCCAGATGCATACCCATGGCTACCTAATGCCAGCTTTAGGCAATCCTTATCTGTTCTAGTCACGTTCATCACCATGTTGGGATCGTTGGCAATTTTGTGGATTCATGCATAG 1365 0.4447 MGVLSAGSIAKHSALTALLIFFISCCSFTHTEAFDSLDPSANITIKWDIMSWTPDGYVAVVTMFNFQQYRHIQAPGWTLGWTWAKKEVIWTMMGGQTTEQGDCSKFKGNVPHCCKKTPTVVDLLPGTPYNQQIANCCKGGVLNSWAQDPTTAASSFQVSVGQAGTSNKTVKLPRNFTLKAPGPGYTCGPAKIVPSTKFVTSDKRRVTQALMTWNVTCQYSQFLAQKTPTCCVSLSSFYNDTVVGCPTCACGCRSNKKDSGNCVEADSPHLASVVSGPGKSSDTSPLVQCTSHMCPIRVHWHVKVNYKEYWRVKITITNFNYRMNYSQWNLVVQHPNFDNITQLFSFNYKSLTPYEGLNDTAMLWGVKFYNDFLNAAGPYGNVQSELLFRKDQSTFTFDKGWAFPRRIYFNGDNCVMPPPDAYPWLPNASFRQSLSVLVTFITMLGSLAILWIHA* 455
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte17g01320 454 PANTHER PROTEIN COBRA 21 442 IPR006918 GO:0010215|GO:0016020
Pte17g01320 454 PIRSF COBRA 6 454 IPR006918 GO:0010215|GO:0016020
Pte17g01320 454 Pfam COBRA-like protein 57 220 IPR006918 GO:0010215|GO:0016020
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte17g01320 Pte-Chr17 28003374 28006612 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte17g01320 1 454 COBRA Gene Family AT3G02210 71.366 0.0 707
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte17g01320 - - egr:104426029 810.831