Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte17g01301 ATGTTACCATTGACAGTGTCTTGTGCAGATGGCAACGGGTTTGAAAAGGGTCGCTTTGAGATCTTGTCTTTATCTGGATCATTTACAGTGACTGATACTGGTGGCATGAGAAGTGAAACTGGTGGTTTGAGTGTCTCTTTGGCCGGGCCTAATGGTCGAGTAATAGGAGGGTGCATTGCTGGTTTATTGACTGCTGCTGGCCCCATTCAAGTATGTCTTCCTTGTTTCTGCTTACTGTTGGATTATTGA 249 0.4498 MLPLTVSCADGNGFEKGRFEILSLSGSFTVTDTGGMRSETGGLSVSLAGPNGRVIGGCIAGLLTAAGPIQVCLPCFCLLLDY* 83
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte17g01301 82 Gene3D - 4 77 - -
Pte17g01301 82 PANTHER AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 9 16 76 IPR039605 GO:0003680
Pte17g01301 82 Pfam Plants and Prokaryotes Conserved (PCC) domain 14 73 IPR005175 -
Pte17g01301 82 ProSiteProfiles PPC domain profile profile. 1 82 IPR005175 -
Pte17g01301 82 CDD DUF296 16 73 IPR005175 -
Pte17g01301 82 SUPERFAMILY AF0104/ALDC/Ptd012-like 15 76 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte17g01301 Pte-Chr17 27832666 27833894 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte17g01301 16 76 AT-hook Motif Nuclear Localized (AHL) Family AT4G12080 67.213 4.92e-22 85.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte17g01301 - - qsu:112039687 100.523