Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte17g01290 ATGGATTATTCTACGAAACTTCAATCAACCTTCAAAGAATTTAGAGCTTCTGCAAACTTATTCTTGTCGCAGTACGAACCTCTTGCTCTTCTTCTAGCTCCCCTTGCTGCTCTCTTTGTAGCGCGAATTCTCCAATCGTTTATCGACCATATTTATGATAAAGGACTCAAAGCCACTCTCATAGGGTTCTTCATGAGTTCCCTCAAATTGGTACCAGGTGTGAAGAGTTACATCGATGCCGAAAAACAGAAGGTTGTAGATCAAATGCAATCTGGTACTAAATCGAAAAGGGATGGTTGGAGAACGGAGTTGCCAAAGGAAGGACTGGGAGTAGAAGTTCTTGAGAGACTGAAAGAGGAGAAGTCCAGAGACGTGGCTTGGCAAGGCAAATGCTCTGGTGCAGTCTACATTGGAGGGAGTGACTCAGAACAACATTTTTCTATAATAAATGAGGCATGCTCAATGTTTGCTCATACCAATCCATTGCATTCAGATGTATTTCCAAGTGTTGCAAAGTTTGAAGCAGAAGTGGTTGCAATGACAGCTACCCTTTTGGGCAGTAAAGAAAAGGCTTCTGGAGGAGAAATATGTGGGAACATGACTTCCGGTGGAACGGAAAGCATATTAATGGCAGTGAAATCTTCACGTGACTATATGAAACATAAAAGGGGAATAACAAAACCTGAAATGATAATTGCTGAATCTGCGCATTCAGCTTATGACAAGGCTGCACAATATTTCAACATTAAGATCAGACGTATCCCTGTAAGGAAAGATTTTCGGGCAGATCCCAAAGCCATAGGTCGACAGATCAACAAAAACACAATCTTGATTATTGGATCTGCCCCAGGGTTTCCCCATGGCATCATTGACCCTATTGAGGAACTTGGTGAACTGGCATCCAAAAATGGTATTTGTCTGCACGTAGACCTCTGTCTCGGAGGTTTTGTGTTGCCTTTTGCTCATAAACTAGGGTACTTGATTCCACCTTTTGACTTCACTGTCAAAGGAGTTACCTCTATCTCAGCGGATGTGCATAAATATGGATTGGCTCCAAAAGGAACGAGTGTGGTTCTATACCGAAATCATGAAATTAGAAAGCATCAATTTGTTGCCGTTACTGAGTGGTCAGGTGGGTTGTATATATCCCCGTCTATAGCTGGAAGCAGGCCTGGAAGTTTGATTGCAGGGGCATGGGCAGCAATGATGTCTTTGGGGGAAAAAGGATATTTGGAAAATACTAAAGCAATTATGGATGCATCGAAGAGAGTAGAGAAAGGTATAGAAGAAATTCCAGAACTACATATCATTGGAAGACCAGACATGACTATCATTGCATTTGGATCCAATTTTGTGGACATATTTGAAGTCAATGATGTCATGACATCCAAAGGCTGGCATTTGAATGCATTGCAAAGACCCAACAGCCTTCATATATGTGTGACGCTACAGCATACATCGGTGGTTGAAGACTTCCTCCAGGATTTGAAGGAATCTGTGCGAACTGTGAAAGAAAATCCAGGCCCAATGACTGGAGGGATGGCACCAATCTACGGTGCTGCTGGGAGGGTACCAGATAGAGCTATGGTTGGGGATCTGTTGGTTAATTACATGGACAGTACTTGCTAA 1629 0.426 MDYSTKLQSTFKEFRASANLFLSQYEPLALLLAPLAALFVARILQSFIDHIYDKGLKATLIGFFMSSLKLVPGVKSYIDAEKQKVVDQMQSGTKSKRDGWRTELPKEGLGVEVLERLKEEKSRDVAWQGKCSGAVYIGGSDSEQHFSIINEACSMFAHTNPLHSDVFPSVAKFEAEVVAMTATLLGSKEKASGGEICGNMTSGGTESILMAVKSSRDYMKHKRGITKPEMIIAESAHSAYDKAAQYFNIKIRRIPVRKDFRADPKAIGRQINKNTILIIGSAPGFPHGIIDPIEELGELASKNGICLHVDLCLGGFVLPFAHKLGYLIPPFDFTVKGVTSISADVHKYGLAPKGTSVVLYRNHEIRKHQFVAVTEWSGGLYISPSIAGSRPGSLIAGAWAAMMSLGEKGYLENTKAIMDASKRVEKGIEEIPELHIIGRPDMTIIAFGSNFVDIFEVNDVMTSKGWHLNALQRPNSLHICVTLQHTSVVEDFLQDLKESVRTVKENPGPMTGGMAPIYGAAGRVPDRAMVGDLLVNYMDSTC* 543
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte17g01290 542 Gene3D Aspartate Aminotransferase, domain 1 111 505 IPR015422 GO:0003824
Pte17g01290 542 SUPERFAMILY PLP-dependent transferases 77 505 IPR015424 -
Pte17g01290 542 Gene3D - 139 406 IPR015421 GO:0003824
Pte17g01290 542 FunFam sphingosine-1-phosphate lyase 1 142 406 - -
Pte17g01290 542 PANTHER - 38 542 - -
Pte17g01290 542 FunFam Sphingosine-1-phosphate lyase 1 503 541 - -
Pte17g01290 542 Pfam Pyridoxal-dependent decarboxylase conserved domain 146 447 IPR002129 GO:0016830|GO:0019752|GO:0030170
Pte17g01290 542 FunFam Sphingosine-1-phosphate lyase 1 395 505 - -
Pte17g01290 542 Gene3D - 102 540 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte17g01290 158 502 Calmodulin-binding Proteins AT3G17760 25.683 1.25e-26 111
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte17g01290 K01634 - jre:109003131 890.567