Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte17g01289 ATGGAGGCGGCTGACCCAACGTTTTTCACTCTTTCATCGTCAGCAACAACTAGCATGCCTCCACCTTCCTGGCCCTTAAGTGCTTTGGATCATCACGATGACATTGAATCAGAAGGCCTTGTCGACAATCAGCTTACAAACTTTGGTGGAAGTCATGTTTCTCAGATGAAAAGTCTGCGTGGCGTACTCCAAGCTGATCCAGAAAATATGTCAGAAAAGAAGGGTGAGAAAAATATGAGGAAGCCAAGATATGCTTTTCAAACGAGAAGCCAAGTCGACATACTTGACGATGGATACAGATGGAGAAAATATGGACAGAAAGCAGTGAAGAACAATAAATTTCCCAGAAGCTACTATCGATGCACTTATCAAGGATGCAGTGTGAAGAAGCAAGTTCAGCGTTTAACAAGAGATGAAGGAGTAGTTGTGACAACGTACGAGGGGATGCATTCACATCCAATCGAGAAGACCACAGATAGCTTTGGGCATATCTTAAGCCAGATGCGAATTTACACACCCTTCTGA 525 0.4362 MEAADPTFFTLSSSATTSMPPPSWPLSALDHHDDIESEGLVDNQLTNFGGSHVSQMKSLRGVLQADPENMSEKKGEKNMRKPRYAFQTRSQVDILDDGYRWRKYGQKAVKNNKFPRSYYRCTYQGCSVKKQVQRLTRDEGVVVTTYEGMHSHPIEKTTDSFGHILSQMRIYTPF* 175
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte17g01289 174 ProSiteProfiles WRKY domain profile. 90 155 IPR003657 GO:0003700|GO:0006355|GO:0043565
Pte17g01289 174 Pfam WRKY DNA -binding domain 96 153 IPR003657 GO:0003700|GO:0006355|GO:0043565
Pte17g01289 174 MobiDBLite consensus disorder prediction 7 23 - -
Pte17g01289 174 FunFam WRKY transcription factor 57 81 155 - -
Pte17g01289 174 SUPERFAMILY WRKY DNA-binding domain 87 154 IPR036576 GO:0003700|GO:0006355|GO:0043565
Pte17g01289 174 Gene3D WRKY domain 74 154 IPR036576 GO:0003700|GO:0006355|GO:0043565
Pte17g01289 174 MobiDBLite consensus disorder prediction 1 25 - -
Pte17g01289 174 PANTHER WRKY TRANSCRIPTION FACTOR PROTEIN 1-RELATED 50 156 IPR044810 GO:0003700
Pte17g01289 174 SMART WRKY_cls 95 154 IPR003657 GO:0003700|GO:0006355|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte17g01289 Pte-Chr17 27681189 27683113 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte17g01289 83 175 WRKY Transcription Factor Family AT5G13080 84.946 1.46e-56 173
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Pte17g01289 WRKY 6.4e-26 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte17g01289 - - gmx:732586 207.223