Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte17g01286 ATGGATGATAGGTTGGTGGGGATGTCAGACAACAATGTTGTATCATCTGCATCATCGAAAAGGACGAGATCACCCAATAGTGGGATCCAAGTTCCTTCTTGTTTAGTCGATGGGTGCAATTCGGACCTTAGTAAATGCAGAGATTATCATCGACGCCACAAAGTTTGTGAGCTTCATTCGAAGACTCCAAGGGTCACAATAAAGGGCCAGGAGCAACGGTTTTGCCAGCAGTGCAGCAGGTTCCATTCATTGGTGGAATTCGACGAAGGAAAACGAAGCTGCAGGAAACGCCTTGATGGACACAACCGACGCCGGAGGAAACCCCAACAGGAAGCTCTCTCCGCGAGTTCAGCAAGATTTCTCGAAAATTACAAAGGTGCAAGATTTCTGGCATTTGATCATCAACAAGTCTTGTTAACTGGTAGTTCTTCTTGGACTGAGCAACTGAAAGCCAAGAACGATCATGTTCTTTACAACATCCCTTCAGAAATCAACTTCAGTGACAGAACTATATCAATCCCTGAATGTGATGAAGAACAAAAGCAATTCTCTTTTCTTCAGGGCACAGGTTCCACATGTCCTGCTTACTCCTCTTCTCAACTTGATCGCGGTGCCGATTTACTGTCAGGCTGCACTGCCAGAAGCCAAAAGACTTTCTCAAACACGTTAAACCGACCAATCCAATCAGACTGTGCTCTCTCTCTTCTGTCATCATCACCTGCTGAGACTCATGAGTTTTCCTTCACACGCACATTGCAGCCAAATGTGATTCCTCCAGCTCGGTCCGTTATCCCCAGCTTCAGTGATATGGGAATGGAGGGTGAGTCGACTAATCCAGTTTTGCTTGGTGGTAGCAATAACAATTCTGACCTCCATTTCCATGGGATGTTTCATGTTGGACCAGATGGTTCCTCTTCAAGTGGCTCTTACCATAAACCTTTCTCCTGGGAGTAG 954 0.4591 MDDRLVGMSDNNVVSSASSKRTRSPNSGIQVPSCLVDGCNSDLSKCRDYHRRHKVCELHSKTPRVTIKGQEQRFCQQCSRFHSLVEFDEGKRSCRKRLDGHNRRRRKPQQEALSASSARFLENYKGARFLAFDHQQVLLTGSSSWTEQLKAKNDHVLYNIPSEINFSDRTISIPECDEEQKQFSFLQGTGSTCPAYSSSQLDRGADLLSGCTARSQKTFSNTLNRPIQSDCALSLLSSSPAETHEFSFTRTLQPNVIPPARSVIPSFSDMGMEGESTNPVLLGGSNNNSDLHFHGMFHVGPDGSSSSGSYHKPFSWE* 318
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte17g01286 317 FunFam Squamosa promoter-binding-like protein 14 25 95 - -
Pte17g01286 317 MobiDBLite consensus disorder prediction 9 28 - -
Pte17g01286 317 ProSiteProfiles Zinc finger SBP-type profile. 31 108 IPR004333 GO:0003677
Pte17g01286 317 PANTHER SQUAMOSA PROMOTER-BINDING-LIKE PROTEIN 4 16 305 IPR044817 GO:0003677
Pte17g01286 317 Pfam SBP domain 34 107 IPR004333 GO:0003677
Pte17g01286 317 Gene3D - 25 95 IPR036893 GO:0003677|GO:0005634
Pte17g01286 317 MobiDBLite consensus disorder prediction 1 28 - -
Pte17g01286 317 SUPERFAMILY SBT domain 32 113 IPR036893 GO:0003677|GO:0005634
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte17g01286 Pte-Chr17 27650185 27651566 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte17g01286 30 132 SBP-box Gene Family AT5G50670 68.932 1.32e-47 162
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF SBP Pte17g01286 SBP 2.1e-30 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte17g01286 - - vvi:100243827 321.242