Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte17g01264 ATGTGCAGTTCTCAGAAGTCGTCAATCTTAGGGACAACAAAAACTTCTTTATTTACCGGAAGGAAATTGAAAGTCAACAAATTTTCAACAAGACCGTCTGGAGGGAGATCCTTCACAGTGTGCGCTGCTGCTGCTGACCCTGACAGACCTTTGTGGTTCCCAGGCAGCACCCCTCCTGCATGGCTTGATGGCAGCCTCCCGGGAGACTTTGGCTTCGACCCTTTGGGTCTTGGGTCGGATCCAGAGTCACTGAGATGGAACGTGCAAGCAGAGCTTGTCCACTGCAGATGGGCCATGTTGGGAGCTGCTGGCATTTTCATCCCTGAGTTCCTAACAAAGATCGGTATTCTAAATACTCCTTCATGGTACACTGCTGGTGAACAGGAATACTTTACAGACACAACTACCCTCTTCATAATAGAGCTAGTTTTGATTGGCTGGGCTGAAGGTAGAAGATGGGCGGACATAATTAAGCCTGGTTCTGTTAACACAGATCCTATCTTCCCCAACAACAAGCTTACAGGAACTGACGTTGGATACCCTGGTGGGCTTTGGTTTGACCCACTTGGATGGGGTAGTGGTTCCCCTGAGAAAATTAAGGAGTTAAGGACAAAGGAGATCAAGAATGGGAGATTGGCCATGTTGGCTGTGATGGGTGCATGGTTCCAACATGTATACACAGGAACAGGTCCTATTGATAACCTATTTGCTCATCTTGCCGATCCTGGTCATGCCACAATATTTGCTGCTTTCACCCCAAAGTGA 765 0.4784 MCSSQKSSILGTTKTSLFTGRKLKVNKFSTRPSGGRSFTVCAAAADPDRPLWFPGSTPPAWLDGSLPGDFGFDPLGLGSDPESLRWNVQAELVHCRWAMLGAAGIFIPEFLTKIGILNTPSWYTAGEQEYFTDTTTLFIIELVLIGWAEGRRWADIIKPGSVNTDPIFPNNKLTGTDVGYPGGLWFDPLGWGSGSPEKIKELRTKEIKNGRLAMLAVMGAWFQHVYTGTGPIDNLFAHLADPGHATIFAAFTPK* 255
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte17g01264 254 FunFam Chlorophyll a-b binding protein, chloroplastic 59 244 - -
Pte17g01264 254 Pfam Chlorophyll A-B binding protein 58 224 IPR022796 -
Pte17g01264 254 SUPERFAMILY Chlorophyll a-b binding protein 42 252 - -
Pte17g01264 254 PANTHER CHLOROPHYLL A/B BINDING PROTEIN 27 252 IPR001344 GO:0009765|GO:0016020
Pte17g01264 254 Gene3D Chlorophyll a/b binding protein domain 59 244 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte17g01264 Pte-Chr17 27487948 27488959 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte17g01264 39 255 Chloroplast and Mitochondria Gene Families AT3G61470 92.166 1.02e-151 421
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte17g01264 K08908 - sind:105168418 481.1