Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte17g01259 ATGCAGAACGAAGAAGGACAAATTACTGAGCTCTATATCCCAAGGAAATGCTCTGCAACAAATAGGCTGATTACTGCGAAGGATCATGCCTCTGTCCAGATCAACATTGGTCATTTGGATGAAAATGGTCTCTACACAAACCAATTTTCGACATTTGCTCTCTGTGGTTTCATTAGAGCACAGGGTGATGCTGACAGTGCATTGGACCGGTTGTGGGTAAAGAAGAAAGGGGAGATCCGTCAGTAA 246 0.439 MQNEEGQITELYIPRKCSATNRLITAKDHASVQINIGHLDENGLYTNQFSTFALCGFIRAQGDADSALDRLWVKKKGEIRQ* 82
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte17g01259 81 ProSitePatterns Ribosomal protein S21e signature. 11 19 IPR018279 GO:0003735|GO:0005840|GO:0006412
Pte17g01259 81 PANTHER 40S RIBOSOMAL PROTEIN S21 1 75 IPR001931 GO:0003735|GO:0005840|GO:0006412
Pte17g01259 81 Pfam Ribosomal protein S21e 1 76 IPR001931 GO:0003735|GO:0005840|GO:0006412
Pte17g01259 81 FunFam 40S ribosomal protein S21 1 81 - -
Pte17g01259 81 PIRSF RPS21e 1 81 IPR001931 GO:0003735|GO:0005840|GO:0006412
Pte17g01259 81 Gene3D - 1 80 IPR038579 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte17g01259 Pte-Chr17 27454358 27457228 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte17g01259 1 81 Cytoplasmic Ribosomal Protein Gene Family AT5G27700 83.951 2.77e-50 150
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte17g01259 K02971 - qsa:O6P43_021738 161.77