LGRPv2

Gene search

Sequence information

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Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Pte17g01256	ATGAAGAACTCATGTAGTTACTTACAACTCAAGTACTTCTCATGCTTTGTAATTTGTTTTGGTATAGCCTTCCAAGTCATTACCAAAACGTTATGCCCATGGTCTACGTTTTTATTTGTCTTCTCATTCCTCACTCTCGTGTCCATCTCCCTCAATTACTGGCTCGTTCCAGGAGGTTTTGCTTGGATAAATCACAGCAAATATGATAAACAAGCCAAACTTTGCGGTCCTATGGGGTGGCCTGTGTTTGGGACCTTGCCTGAAATGGGTTCTCTTGCTCACAGAAAACTAGCAGCCATGGCAGCTTCATTAGGAGCCAAAAGGCTTATGGCTTTTAGCCTAGGAGCTACACCAGTTATCATCAGCAGCCACCCTGAGACTGCGAGAGAAATTCTATGTGGCTCGTCATTCTCAGACCGCCCCATTAAAGAGTCAGCGCGTTTGCTTATGTTTGAGCGTGCCATTGGCTTCGCCCCCTCTGGTGGGACTTACTGGAGACATCTTAGAAGGATTGCAGCAAACTGCATGTTTTCTCCTAGGAGAATTTCAAGCCTAGAGAGTCTCAGACAACATGTTGCCAATGAAATGATATTAGAGATATGTGAGGAGATGAGGTCCAGTGAGACCGTGAAAATCAGAAGCATATTGCAGAGAGGATCTCTGAGCAACATGCTAGAGAGTGTGTTTGGTACGTTTTCCTCTTCGGAAAGGGAGGAGTTGGACGGTATGGTGAAGGAAGGGTATGATCTGATTGCAAACTTCAATTGGGAAGATCATTTTCCTTTTAGGTTTTTGGACTTCCATGGAGTGAAGAGAAGAGGTCATAGATTGGCAGCTAAGGTTAACAGTGTGATAGGTGAGATTGTGAAAGCCAGAGAGAAAGGTGGAGAGTTCAGTAAGCATAATGATTTTCTCAGTGCTTTAATGTCTTTGCCAAAAGAGGAACAGTTGAGCAATCCAGATATGGTGGCCATTCTTTGGGAGATGATTTTCAGGGGAACAGATACAGTGGCTATACTACTCGAGTGGATTCTGGCCAGGATGGTATTACACCAAGACGTACAAATGAGAGTAAGAGAAGAGATTGACATGTGCATTGGCATGCAGCGTCACGTGCAAGATTCTGATATTCCGAACCTTCATTACCTGCAAGCCACAGTGAAAGAAGTTCTACGGCTGCACCCACCAGGGCCTTTGCTTTCGTGGGCCCGATTAGCCGTCCATGATGTCCACGTTGACAAAGTCTTCATCCCCGCTGGCACAACTGCCATGGTTAACATGTGGTCCATCACCCACGATGCGGACATCTGGGAGGACCCGTGGGCCTTCAAGCCTGAAAGGTTCATTAAGGAAGATATCTTCATCATGGGTTCGGATCTTAGACTCGCACCGTTCGGGTCAGGTCGGAGGGTTTGTCCTGGGAAGGCGCTTGGCCTGGCCACAGTTCACTTGTGGCTCGCACGTCTTTTGCACCAGTTCATATGGCTCCCGGCACAGCCCGTTGACCTTTCGGAGTGTTTGAGGCTTTCACTTGAAATGAAAAGACCGTTGGCTTGCCACGTGGTTCGCAGATATGGGACAGGCAACATTAGCTCATCATAG	1602	0.47	MKNSCSYLQLKYFSCFVICFGIAFQVITKTLCPWSTFLFVFSFLTLVSISLNYWLVPGGFAWINHSKYDKQAKLCGPMGWPVFGTLPEMGSLAHRKLAAMAASLGAKRLMAFSLGATPVIISSHPETAREILCGSSFSDRPIKESARLLMFERAIGFAPSGGTYWRHLRRIAANCMFSPRRISSLESLRQHVANEMILEICEEMRSSETVKIRSILQRGSLSNMLESVFGTFSSSEREELDGMVKEGYDLIANFNWEDHFPFRFLDFHGVKRRGHRLAAKVNSVIGEIVKAREKGGEFSKHNDFLSALMSLPKEEQLSNPDMVAILWEMIFRGTDTVAILLEWILARMVLHQDVQMRVREEIDMCIGMQRHVQDSDIPNLHYLQATVKEVLRLHPPGPLLSWARLAVHDVHVDKVFIPAGTTAMVNMWSITHDADIWEDPWAFKPERFIKEDIFIMGSDLRLAPFGSGRRVCPGKALGLATVHLWLARLLHQFIWLPAQPVDLSECLRLSLEMKRPLACHVVRRYGTGNISSS*	534

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Annotation information

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Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Pte17g01256	533	SUPERFAMILY	Cytochrome P450	76	524	IPR036396	GO:0004497\|GO:0005506\|GO:0016705\|GO:0020037
	Pte17g01256	533	PRINTS	P450 superfamily signature	463	472	IPR001128	GO:0004497\|GO:0005506\|GO:0016705\|GO:0020037
	Pte17g01256	533	PRINTS	P450 superfamily signature	472	483	IPR001128	GO:0004497\|GO:0005506\|GO:0016705\|GO:0020037
	Pte17g01256	533	PRINTS	P450 superfamily signature	332	349	IPR001128	GO:0004497\|GO:0005506\|GO:0016705\|GO:0020037
	Pte17g01256	533	PRINTS	P450 superfamily signature	385	396	IPR001128	GO:0004497\|GO:0005506\|GO:0016705\|GO:0020037
	Pte17g01256	533	PRINTS	E-class P450 group I signature	426	450	IPR002401	GO:0004497\|GO:0005506\|GO:0016705\|GO:0020037
	Pte17g01256	533	PRINTS	E-class P450 group I signature	462	472	IPR002401	GO:0004497\|GO:0005506\|GO:0016705\|GO:0020037
	Pte17g01256	533	PRINTS	E-class P450 group I signature	472	495	IPR002401	GO:0004497\|GO:0005506\|GO:0016705\|GO:0020037
	Pte17g01256	533	PRINTS	E-class P450 group I signature	321	338	IPR002401	GO:0004497\|GO:0005506\|GO:0016705\|GO:0020037
	Pte17g01256	533	PRINTS	E-class P450 group I signature	384	402	IPR002401	GO:0004497\|GO:0005506\|GO:0016705\|GO:0020037

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Duplication type information

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Select	Gene	Chromosome	Start	End	Duplicated_type
	Pte17g01256	Pte-Chr17	27433439	27435922	Transposed

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Functional genes information

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Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Pte17g01256	41	524	Cytochrome P450	AT1G13710	52.600	1.49e-174	501

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Pathway information

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Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Pte17g01256	-		-	qsa:O6P43_023855	753.821

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