LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Pte17g01249	ATGAGCACAAGGAACCTTCGTTTTCAACTCCTTCACTCTTTTGTGTTTCTACTTTTCGTATTTCACTTCCCAATTGAACCAAATCAACGATTCGTTCACTCTCTCTCCCCTGATGGACTTTCTCTTCTCTCTCTAAAATCAGCCGTTGATGATGTCTCTGTTTTTGCTGACTGGAATGAAAATGACGCTACTCCCTGTCATTGGACGGGCATTTCCTGCATGAACATCACAGGATTCCCCGAACCCCGTGTTGTCGGTGTCGCTGTATCTGGTAAGAATCTACGGGGCTACATTCCATCGGAATTGGGAAGCTTGGTGTATCTCCGGCGTCTCAACCTCCATAGCAACAACTTATACGGGTCCATACCTGTCCAGCTCTTCAATGCTACATCTCTTCACAGCATTTTTCTCTATGGGAACAATCTTTCCGGTATACTCCCTCCTTCGATCTGCAACATTCCCAGGCTCCAAAACCTTGATCTTTCTGACAATTCACTCTCGGGTCCGATAACGGAAGCCTTGAAGGATTGTAAGCAGTTGCAGAGACTCATACTTGCCAGGAACAAGTTTACTGGGGATCTCCCATCAGGTGTTTGGTCTGAATTGGAGAACTTGGTTCAACTGGACCTTTCGTCGAACGAGTTTACTGGACGCATTCCTGAGGGCATTGGCGAGCTGGGTTCTCTCTCTGGCACGCTAAACCTTTCATTCAATCACTTGTCCGGTGAAATCCCAAAATCGCTTGGGAATTTACCTGTGACCGTGAGTTTTGATCTTCGGAGCAACAATCTCAGCGGCGAGATACCGCAGACGGGCACATTTGCAAACCAGGGTCCGACTGCGTTTCTCAACAATCCTAAACTATGCGGGTTTCCTCTCCAGAAAGCTTGTCATGGGTCAGAGTCAACGGGTACTCCAAATTCAGCAACGGTATCAGGAAACAATTCCGGGAAAGGCTTAAGTACGGGATTGATCATATTGATTTCAGTGGCTGATGCAGCTGGAGTTGCACTCATTGGTCTTGTGATGGTGTACATATACTGGAAGAAGAAAGACAATTCCAACGGCTGTAGCTGCACAGGGAAAAGGAAATTTGGGGACAATGAGAAATCCCATCTTTGTTCTTTCCCATGCATGAACGGATTTAAAAACGATGACTCTGAATTGGAAGACACTGAAAAAGCAGAGAGAGGGAAAGGGGAAGGAGACTTGGTGGCCATTGATAAAAATTTCAACTTTGAACTGGATGAGCTTCTGCGAGCTTCGGCTTATGTATTGGGGAAGAGTGGGTTAGGCATTGTATACAAAGTGGTGCTAGGAAATGGGGTGCCTGTTGCTGTGAGAAGGTTGGGTGAAGGTGGTGAACAGAGGTACAAGGAATTTGTGGCAGAAGTTCAAGCAATTGGAAAAGTCAAGCATCCTAACATTGTGAGTTTAAGAGCGTATTACTGGGCTCCTGATGAAAAGCTTCTCATCAGTGATTTCATCTCCAACGGCAATTTGGCTTACGCTCTTCGAGGAAGAGGTGGCCAACCCTCACCTAACCTCTCATGGTCAATCAGACTCAAAATTGTAAAAGGAACAGCCAGAGGTTTGGCCTATCTTCACGAGTGCAGCCCAAGAAAATTCGTCCATGGTGACATCAAACCATCTAATATCCTACTTGACAACGATTTTCAACCACACATATCAGATTTCGGCCTCAGCAAATTGATCACAATAACAGGCAACAACCCATCATCTTCAGGTGGTTTCATGGGAGGAGCTCTACCTTATATCAAGTCCTCCTCACAGGCAGAGAGAACGAACCATTATCGAGCCCCTGAAGCTCGTGTACCAGGCAGCAGACCTACACAAAAATGGGACGTTTATTCATTTGGAGTTGTACTGCTTGAAATACTCACTGGAAAATCGCCGGAACTGTCTCCCACCACATCAACTTCTGTGGAAGTTCCAGAGTTAGTGAAGTGGGTGAAGAAAGGGTTCGAAGAAGAGAGTCCTTTGTCAGATATGGTGGATCCTTCTTTGCTCCAAGAAGTGCGTGCCAAGAAAGAGGTATTAGCTGCATTTCACGTGGCATTGGCATGCACAGAGGGAGACCCTGAGATTCGACCTAGGATGAAATCTGTGTCTGAAAATCTTGAAAGAATTTGA	2154	0.4591	MSTRNLRFQLLHSFVFLLFVFHFPIEPNQRFVHSLSPDGLSLLSLKSAVDDVSVFADWNENDATPCHWTGISCMNITGFPEPRVVGVAVSGKNLRGYIPSELGSLVYLRRLNLHSNNLYGSIPVQLFNATSLHSIFLYGNNLSGILPPSICNIPRLQNLDLSDNSLSGPITEALKDCKQLQRLILARNKFTGDLPSGVWSELENLVQLDLSSNEFTGRIPEGIGELGSLSGTLNLSFNHLSGEIPKSLGNLPVTVSFDLRSNNLSGEIPQTGTFANQGPTAFLNNPKLCGFPLQKACHGSESTGTPNSATVSGNNSGKGLSTGLIILISVADAAGVALIGLVMVYIYWKKKDNSNGCSCTGKRKFGDNEKSHLCSFPCMNGFKNDDSELEDTEKAERGKGEGDLVAIDKNFNFELDELLRASAYVLGKSGLGIVYKVVLGNGVPVAVRRLGEGGEQRYKEFVAEVQAIGKVKHPNIVSLRAYYWAPDEKLLISDFISNGNLAYALRGRGGQPSPNLSWSIRLKIVKGTARGLAYLHECSPRKFVHGDIKPSNILLDNDFQPHISDFGLSKLITITGNNPSSSGGFMGGALPYIKSSSQAERTNHYRAPEARVPGSRPTQKWDVYSFGVVLLEILTGKSPELSPTTSTSVEVPELVKWVKKGFEEESPLSDMVDPSLLQEVRAKKEVLAAFHVALACTEGDPEIRPRMKSVSENLERI*	718

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Pte17g01249	717	FunFam	Leucine-rich repeat receptor-like protein kinase	36	196	-	-
	Pte17g01249	717	PANTHER	LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE PXC1	179	717	IPR046959	-
	Pte17g01249	717	FunFam	Os07g0541700 protein	505	583	-	-
	Pte17g01249	717	FunFam	Leucine-rich repeat receptor-like protein kinase	403	495	-	-
	Pte17g01249	717	Gene3D	Ribonuclease Inhibitor	36	202	IPR032675	-
	Pte17g01249	717	Gene3D	Phosphorylase Kinase; domain 1	403	495	-	-
	Pte17g01249	717	SUPERFAMILY	L domain-like	47	294	-	-
	Pte17g01249	717	SUPERFAMILY	Protein kinase-like (PK-like)	425	714	IPR011009	-
	Pte17g01249	717	ProSitePatterns	Serine/Threonine protein kinases active-site signature.	543	555	IPR008271	GO:0004672\|GO:0006468
	Pte17g01249	717	Pfam	Leucine rich repeat N-terminal domain	36	73	IPR013210	-
	Pte17g01249	717	Pfam	Protein kinase domain	425	650	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Pte17g01249	717	CDD	STKc_IRAK	426	717	-	-
	Pte17g01249	717	Gene3D	Ribonuclease Inhibitor	203	295	IPR032675	-
	Pte17g01249	717	FunFam	Leucine-rich repeat receptor-like protein kinase	204	299	-	-
	Pte17g01249	717	SMART	serkin_6	424	717	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Pte17g01249	717	Pfam	Leucine rich repeat	108	166	IPR001611	GO:0005515
	Pte17g01249	717	Gene3D	Transferase(Phosphotransferase) domain 1	496	717	-	-
	Pte17g01249	717	ProSiteProfiles	Protein kinase domain profile.	420	717	IPR000719	GO:0004672\|GO:0005524\|GO:0006468

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Pte17g01249	Pte-Chr17	27385721	27389578	Dispersed/Wgd

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Pte17g01249	34	718	Receptor kinase-like Gene Family	AT1G67510	71.875	0.0	999

Transcription factors information

Select	Regulatory Factors	Family	Gene	Hmm_acc	Hmm_name	E_value	Clan
	PK	RLK-Pelle_LRR-III	Pte17g01249		Pkinase	5.6e-33	CL0016

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Pte17g01249	-		-	qsa:O6P43_023877	1168.68