Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte17g01244 ATGGCAGCTGGCAGGCCTGGAGTTTATCGCGAAACTGGTTTTACGGACAGTGAATCCAATTATGATGCTTCAAGGCACGGTTTGGCTAATGCAGAAGCAGCGTATAATGGGATAAGGAATGGTAACCGTGACAACGATAGGGGTCGAGGCAGGGATGTGAGAGATAGGATTCGTGTAAGGCAGAAGGAGATTAAGGAGAGAGAATTTTCGAATGGATGTTATCGTTCCTCTTCAAGTAGGAGTGAGTCAGGTAGCAGTGGTGGAAATCAAAGTGGTGCTCTAGGTCCTAAGCGTTGTGGTTTATTTGTTAGAAATGTGGATAAGGAGCCTGGTGAATTATCCAGTGAGAGCGGATCTGATGATGCTGTTGAATCGGAATCACAGGTGAAAGATGTCGAGGCTGAGAAGGTTACAGAAAATGGGACACAGTCACCAAGGCCAGAGAAGAGGAAATTCTCGCCAATAGTATGGGATCAGGATGACAAAGAGGTCAGTGCTTGGTCTAATGGTGGGACAACCGCTGCAACAACAAGACTTCCTCCTCCTCCTCCACTGTCCAAAACATCCCTTGAAACCCCTAATGTCTCGTCTGACGTAGTTCCAGAGGTACACCCAGTAAAAAAGGTTGAAGGTGCAAATATCCAGTCACGGGCACATGTTGACATTCCTCCTCAAGCTGAAGCAGAGCAATACGCTCAGTCAGAATCTCCAGTAGGTTTTTCTCATGTATCTCTTAATCATAAGTGGGGTAACGGTCCCGTAGCTGACAAACCAGAGAGTGAAGATTATGTTCCTACACGTAATATATCATCATCCAGATGGGCAGCTGGAAGCAGTTCCCCTGTTGATGAAGGTGAAATTGTAGATTACGAGGATATGCCAAAAAGGAGGAAGAAAATGTCTCTTTCTGAATCATTGGTATCTAGAGGAAGGCCTAAATTGTTGAGTCCAGATACTATGGATTCCAGAAGAGAGGGTTTGGAGGGAGCAATAGCCAAATCATATGATTCTGATGAGCTAGGTCAATGTACTAGGTCATCGAGTAGGGATGAATACCCCAGTTATGATTCAGAGAGGGACGACTACATGGATATTGATACTGAGCGTGATAAAAACGGTAGCAGTCCTTCTCCGTTGGTTACAGATTATGAGGATGATGATAACAGCCATGAAACTCCTGAACTTCCAACTCCTCCTCAGAGGACTGTTAACATGCTGCATGGATGTAGAAGCGTTGATGAGTTCGAGAGGCTTAATAAGATAGACGAGGGCACTTATGGTGTTGTATACAGAGCGAGAGATAAGAAGAATAGTGAGATTGTAGCATTGAAGAAGGTAAAAATGGAAAAGGAAAAGGAGGGTTTTCCTCTCACTTCTCTTCGGGAGATAAACATCCTTCTTTCTTTTCATCACCCTTCTATTGTGGATGTAAAGGAAGTTGTGGTTGGGAGTAGTCTTGACAGTATTTTTATGGTGATGGAATACATGGAACACGATCTCAAAGGACTGATGGAAACAATGAAGCAACCATTTAGTCAGAGTGAAGTGAAGTGCCTGATGCTTCAGCTTTTAGAAGGTATTAAATACCTCCATGACAATTGGGTGCTTCATCGGGATTTGAAGACTTCCAACCTTCTTTTAAATAATAGGGGTGAGTTGAAAATTTGTGACTTTGGTTTGGCCCGTCAGTATGGCAGTCCGTTGAAAACGTATACACACTTGGTGGTTACTCTTTGGTACAGGGCACCTGAACTCCTTCTGGGGACCAAGAAGTATACGACAGCTATTGACATGTGGTCCTTAGGTTGTATTATGGCTGAGTTATTGTCGAAGGAGCCTTTGTTCAATGGGAAGACTGAATTTGATCAACTTGATAAGATCTTTAGGATTTTAGGAACACCAAATGAAGCAATTTGGCCTGGCTTCTCCAAGCTTCCTGGTGTCAAGGTCAACTTTGTCAAGCACCAGTATAACCTACTCCGTAAAAAATTCCCGGCCACATCTTTCACTGGGTCACCAGTCCTCTCTGATGCTGGATTTGACTTGCTGAATAAACTTCTCACTTATGACCCTGAGAAGCGGATCACAGCTGAAGCTGCCCTTGATCATGTTTGGTTCCACGAAGTTCCTCTTCCAAAATCTAAAGAATTTATGCCTACTTTTCCTGCTCAACATGCTCAAGACAGGCGCATGAGAAGAGTGCTGAAGAGTCCAGATCCTTTAGAAGAGCAGCGCAGAAAGGAGTTGCAGCAGGGAGAATCAGGAGCTGGGGGTTTGTTTGGATGA 2286 0.4418 MAAGRPGVYRETGFTDSESNYDASRHGLANAEAAYNGIRNGNRDNDRGRGRDVRDRIRVRQKEIKEREFSNGCYRSSSSRSESGSSGGNQSGALGPKRCGLFVRNVDKEPGELSSESGSDDAVESESQVKDVEAEKVTENGTQSPRPEKRKFSPIVWDQDDKEVSAWSNGGTTAATTRLPPPPPLSKTSLETPNVSSDVVPEVHPVKKVEGANIQSRAHVDIPPQAEAEQYAQSESPVGFSHVSLNHKWGNGPVADKPESEDYVPTRNISSSRWAAGSSSPVDEGEIVDYEDMPKRRKKMSLSESLVSRGRPKLLSPDTMDSRREGLEGAIAKSYDSDELGQCTRSSSRDEYPSYDSERDDYMDIDTERDKNGSSPSPLVTDYEDDDNSHETPELPTPPQRTVNMLHGCRSVDEFERLNKIDEGTYGVVYRARDKKNSEIVALKKVKMEKEKEGFPLTSLREINILLSFHHPSIVDVKEVVVGSSLDSIFMVMEYMEHDLKGLMETMKQPFSQSEVKCLMLQLLEGIKYLHDNWVLHRDLKTSNLLLNNRGELKICDFGLARQYGSPLKTYTHLVVTLWYRAPELLLGTKKYTTAIDMWSLGCIMAELLSKEPLFNGKTEFDQLDKIFRILGTPNEAIWPGFSKLPGVKVNFVKHQYNLLRKKFPATSFTGSPVLSDAGFDLLNKLLTYDPEKRITAEAALDHVWFHEVPLPKSKEFMPTFPAQHAQDRRMRRVLKSPDPLEEQRRKELQQGESGAGGLFG* 762
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte17g01244 761 FunFam cyclin-dependent kinase G-2 isoform X1 400 497 - -
Pte17g01244 761 CDD STKc_CDC2L1 409 706 IPR045267 GO:0004674|GO:0005524|GO:0006468
Pte17g01244 761 Gene3D Transferase(Phosphotransferase) domain 1 498 739 - -
Pte17g01244 761 MobiDBLite consensus disorder prediction 316 332 - -
Pte17g01244 761 MobiDBLite consensus disorder prediction 264 278 - -
Pte17g01244 761 MobiDBLite consensus disorder prediction 736 761 - -
Pte17g01244 761 MobiDBLite consensus disorder prediction 288 304 - -
Pte17g01244 761 MobiDBLite consensus disorder prediction 42 70 - -
Pte17g01244 761 ProSiteProfiles Protein kinase domain profile. 415 706 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pte17g01244 761 MobiDBLite consensus disorder prediction 123 158 - -
Pte17g01244 761 ProSitePatterns Serine/Threonine protein kinases active-site signature. 535 547 IPR008271 GO:0004672|GO:0006468
Pte17g01244 761 MobiDBLite consensus disorder prediction 251 399 - -
Pte17g01244 761 MobiDBLite consensus disorder prediction 71 92 - -
Pte17g01244 761 Gene3D Phosphorylase Kinase; domain 1 400 497 - -
Pte17g01244 761 SUPERFAMILY Protein kinase-like (PK-like) 407 712 IPR011009 -
Pte17g01244 761 Pfam Protein kinase domain 415 706 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pte17g01244 761 FunFam Cyclin-dependent kinase G-2 498 737 - -
Pte17g01244 761 Coils Coil 433 453 - -
Pte17g01244 761 MobiDBLite consensus disorder prediction 351 371 - -
Pte17g01244 761 MobiDBLite consensus disorder prediction 1 218 - -
Pte17g01244 761 SMART serkin_6 415 706 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pte17g01244 761 PANTHER CELL DIVISION PROTEIN KINASE 413 712 - -
Pte17g01244 761 MobiDBLite consensus disorder prediction 736 750 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte17g01244 Pte-Chr17 27327743 27333464 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte17g01244 408 752 Core Cell Cycle Gene Families AT5G10270 44.772 1.58e-93 299
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CMGC_CDK-PITSLRE Pte17g01244 Pkinase 1.7e-74 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte17g01244 K08818 - qsa:O6P43_030571 1040.8