Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte17g01227 ATGTTACAGCAAGCAATTTCAGAAGCCATCAACGACATACCGAAGCAATTTCAAACAAAGGAAGCTCGCAACGAGCAAAGAAAAGGGAAGAAGCACCCACATACCGAAGCCAGCAACGACAGAAAGAAAAGAGAAGAAGCACCCAGTGAAGAAGACGCATGGAGGATGGCCAAATCGAAGCCAGAAACGCTCGGTGTGCTCGATGAAGAAGAAAGGCTCGCGATGAGGAAGGCTCCAATCTTGCATCATTTCTCAGAATCTATTGCTGGGGCACCAATAATTCGTTGCCTCCACCAAGAGCCACGTTTCTTGGCAAAGCTTATGGATCTAATCGATAATTATTTGCGTGTCGTATTCCATATTTCTGCTACAATGGAGTGGCTGTGTGTTCAGATCAATTTCCTCTTCAACCTAGTATTCTTCCTCGTTCTCATCATCCTTGTGATTTTGCCTAGATCTGCCATCGACCCAAGATTTAAGATCCAGGTTAGGTATAATTCAACAGATCCAACACTCTTCCAAGGTACTATTAGGACTAATGTGGATCCCCTGGAGCAACACTCAGATCAAGAAATTTGGGAGGTTCTTAACAAACGTCGCCTTGCCGAGAATGTGAAGAAGGATCTGAGGCTTCTTGATGCACCAGTTGCTGAGAGTGGAGAAAATTGGAGTCTTGGGCAGAGGCAGCTTGTGTGCCTTGCAAGGGTGCTGCTGAAAAGAGAGAGAATATTGATACTGGATGAAGCAACAGCATCAATAGACACAGGAACTGATAATCTAATTCAAACAACGATAAGGAAGAGACGAGTAGATGCACTGCCATCACAGTTGCTCATAGGATCCCTGCTGTAA 852 0.4484 MLQQAISEAINDIPKQFQTKEARNEQRKGKKHPHTEASNDRKKREEAPSEEDAWRMAKSKPETLGVLDEEERLAMRKAPILHHFSESIAGAPIIRCLHQEPRFLAKLMDLIDNYLRVVFHISATMEWLCVQINFLFNLVFFLVLIILVILPRSAIDPRFKIQVRYNSTDPTLFQGTIRTNVDPLEQHSDQEIWEVLNKRRLAENVKKDLRLLDAPVAESGENWSLGQRQLVCLARVLLKRERILILDEATASIDTGTDNLIQTTIRKRRVDALPSQLLIGSLL* 284
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte17g01227 283 Gene3D - 154 278 IPR027417 -
Pte17g01227 283 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 71 149 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Pte17g01227 283 PANTHER ATP-BINDING CASSETTE SUB-FAMILY C 74 151 - -
Pte17g01227 283 SUPERFAMILY ABC transporter transmembrane region 74 150 IPR036640 GO:0005524|GO:0016020
Pte17g01227 283 MobiDBLite consensus disorder prediction 1 55 - -
Pte17g01227 283 Pfam ABC transporter 158 251 IPR003439 GO:0005524
Pte17g01227 283 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 165 269 IPR027417 -
Pte17g01227 283 MobiDBLite consensus disorder prediction 18 55 - -
Pte17g01227 283 Gene3D ABC transporter type 1, transmembrane domain 68 153 IPR036640 GO:0005524|GO:0016020
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte17g01227 Pte-Chr17 27132444 27134346 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte17g01227 162 262 Calmodulin-binding Proteins AT2G36910 33.654 1.39e-08 53.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte17g01227 - - pop:7477044 171.014