Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte17g01214 ATGGAGGATGAAGTGCAATTCACTGCAAAGCAATTCATTAAACCTTCTTCTCCAACACCCCTTCACCTGCGCCATTACCAGAATTCTTTCCTCGACCAAATCACTCCCCATGTCTACAATCCTATGGTCTTCTTCTTTGACAGTACACCCCAATTTGATACCGTAGAAAATATATCGAAGAAACTAAGGAAATCTCTGTCGGAGGTCTTAGTTCAATATTACCCTCTTGCTGGAAGATTCATGCACGAGTGTTATGTAGAATGCAATGATGAAGGCGTCCCCTTCGTCGAAGCAAAAATGAGATGCCAACTTGCTGACTTCATTAGAAATCCAGTCCACGCTGAGCTCAATAAATTGGTTCCCTACGATTTTGATGCTCTGGCTGACTTACCCCTTTGTGTGCAGCTTACATTCTTTGATTGCGGTGGCATTGCGATTGGAGCTGCCGTTTCCCATCGGATTGCAGATGCACTATCTTACTTCACCTTCGTGAACGCTTGGGCAAAAGTTGCACGAAATAATGGAGGAATGGTTCATGGCATGAAGGTTGAGTTTACATCTTCCAAACTATTCCCACCAAAAGATATGAGTTGGTACGATCCGAACTTTTACATAGCAAAGGATCGGGATATCATATCAAAGAGGTTTGTGTTTGATGCTAGTAGCATTGAAGCTCTCAGAACCAAGTTTGACAAAGCAACAGCATGCATGCAAAGTCCAAAGCCTCCTTCAAGAGTCGAGACTCTGTCAGCTTTCATATGGAGCCGTTTTGTCGCTGTGACACGGTCTAAAACACCCGAACCTCAAACCCTCAATGTTGTTACTTACACAATCAATCTCCGACCGAGGATGGAACCACCTTTACCCGATTACTCATTCGGAAACTATTTTTCCTCGGCGGCAGCACTACTCACAGTGCAGAAAGGGGAAGATCAACATTGTTATGATTTTATCAAGCAGGTAAGGGAACAGATAAAGAATATTGACAATGAATACGTTAAAAAACTTCAAGGGCAAGAATACTTGAATCATATGAAGGAAAGTTTGCAGAGGAAGAGGACGGAACTTATACGTATTTTTAACTTCACGAGTTTGTGCAGGTTTCCTCTGTATGATGCTGATTTTGGATGGGGGAGGCCTATATGGATAGGTCTGCCTGCAAAGAAGTTTAGAAACACTGTTACCTTTATGGACACGAGAAATGGGGGTGGAATTGAAGCTTACATCTGCTTGGCATTAGAAAACATGGCCAAGTTTGAAAATGACAAGGAGTTTCTTGCATACGTCTGTTAG 1293 0.4261 MEDEVQFTAKQFIKPSSPTPLHLRHYQNSFLDQITPHVYNPMVFFFDSTPQFDTVENISKKLRKSLSEVLVQYYPLAGRFMHECYVECNDEGVPFVEAKMRCQLADFIRNPVHAELNKLVPYDFDALADLPLCVQLTFFDCGGIAIGAAVSHRIADALSYFTFVNAWAKVARNNGGMVHGMKVEFTSSKLFPPKDMSWYDPNFYIAKDRDIISKRFVFDASSIEALRTKFDKATACMQSPKPPSRVETLSAFIWSRFVAVTRSKTPEPQTLNVVTYTINLRPRMEPPLPDYSFGNYFSSAAALLTVQKGEDQHCYDFIKQVREQIKNIDNEYVKKLQGQEYLNHMKESLQRKRTELIRIFNFTSLCRFPLYDADFGWGRPIWIGLPAKKFRNTVTFMDTRNGGGIEAYICLALENMAKFENDKEFLAYVC* 431
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte17g01214 430 Pfam Transferase family 4 425 - -
Pte17g01214 430 PANTHER F21J9.9 7 429 - -
Pte17g01214 430 Gene3D - 209 427 IPR023213 -
Pte17g01214 430 Gene3D - 2 199 IPR023213 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte17g01214 Pte-Chr17 27032041 27033799 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte17g01214 4 420 Monolignol Biosynthesis Gene Families AT5G48930 26.637 8.23e-35 132
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte17g01214 K13065 - qsa:O6P43_018286 442.965