Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte17g01210 ATGTGGCAAAAACAGTACAGCCAATCTTCTCACAGAGATTCCATTCAAACTCTTGAAGCCGACATCCATCATGCGAATGCCCTGGCTGCAGCTCTCCCAAGAGAATATGGTGGGGGTAACTATTTCGAGATGAGGCTATCTTACAGCCCATTTGCTCATTTTTTCTTGTATTGGATCGAATGGTTGGACATCAGTTGCACAGATACTCTTGCGAGTTTTTTAGGCTTACTTCACATACTTATACACAAGGTTTATGTTGATGGAATGCCATCCATGTCCTCGAAAGAAAGGAAGGCCACTGTAAAAGAGTTCTATGCTGTGATATATCCTTTACTGAAGCAACTTGAAAGTGAATTACGCTACATGGATCAGAATCTTCAAGCTGGCACGAAAGGTTTTGGCAGAAATAGGCTTGAGCGAAATTCCAGTAGGGATCAAGAGAGAGATGGTGAATGTGGCATATGCATGGAAAACAATACCAAGATGTTACTGCCAAATTGTGGCCATTCTATGTGTATCACTTGCTTCCATGACTGGAATTCAAGATCAGAATCCTGCCCTTTCTGCCGTGGAAATCTCAAGAGAGTTGCATCTACAGACTTATGGGTTGTTGTAAACAAAGATGAAGTGATTGACACCGATACTCTAGCCAAGGAAAATTTCGACCGTTTCTATGATTACATGGAAACCCTGCCTCTCATCGTGACAGATATAAATCTATCTCTTTACGATTACATACTTTGA 744 0.414 MWQKQYSQSSHRDSIQTLEADIHHANALAAALPREYGGGNYFEMRLSYSPFAHFFLYWIEWLDISCTDTLASFLGLLHILIHKVYVDGMPSMSSKERKATVKEFYAVIYPLLKQLESELRYMDQNLQAGTKGFGRNRLERNSSRDQERDGECGICMENNTKMLLPNCGHSMCITCFHDWNSRSESCPFCRGNLKRVASTDLWVVVNKDEVIDTDTLAKENFDRFYDYMETLPLIVTDINLSLYDYIL* 248
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte17g01210 247 PANTHER RING FINGER PROTEIN 41, 151 10 240 - -
Pte17g01210 247 FunFam RING/U-box superfamily protein 134 199 - -
Pte17g01210 247 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 124 201 IPR013083 -
Pte17g01210 247 SMART ring_2 152 189 IPR001841 -
Pte17g01210 247 Pfam Zinc finger, C3HC4 type (RING finger) 149 195 - -
Pte17g01210 247 SUPERFAMILY RING/U-box 151 196 - -
Pte17g01210 247 ProSiteProfiles Zinc finger RING-type profile. 152 190 IPR001841 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte17g01210 Pte-Chr17 27013446 27015985 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte17g01210 151 211 Rapid Response to Elicitors AT3G16720 29.231 4.06e-06 45.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte17g01210 - - pper:18793302 321.627