Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte17g01204 ATGGCAACTCTACTATCATGTGGTCAGAGCTGCATAGTATTGGCTCCTTGCTCACGCCGGAGCAGAACTGTGAACCCATTTCTTCATAGACCTCAATACGGTGGTGTCAGCTACCCGTCCAACAAGCGGTTTCTTCAGGGTTCCTTATCTGTTGTCAGATTGGGGTACAATTCGGGCTTCCTTCCGGACCCGGATGGTGCGGAGGAGGCGATAAGGCACCTATTTGGTCGAGTCGAAGGTCTTATTTACACAATAGCTGACGCTGCCGTTTCATCTTCGGATACGGTGCCCGCAACAACCGTACCCGCCAAACAAAGTAACGATTGGCTATCTGGGATTACGAGTTACATGGAAACTGTTCTCAAGGTTCTCAAGGATGGCCTTTCAACTTTACATGTGCCTTACGCTTATGGTTTTGCAATTATACTCCTCACAGTTCTTGTTAAGGCTGTCACCTTCCCGTTGACAAAGAAACAGGTAGAATCTGCAATGGCTATGCGGTCTCTCCAACCTCAAATAAAAGCTATTCAGCAACAGTATGCTGGGGATCAGGAGAGGATTCAGCTTGAAACTGCTCGGTTATATAAACTGGCTGGCATAAATCCTCTTGCAGGATGCTTGCCTACACTTGCAACTATACCAGTGTGGATTGGATTGTACCGAGCTCTCTCAAATGTAGCAGACGAGGGACTTCTTACTGAAGGCTTCTTTTGGATACCTTCACTTGCTGGTCCAACTACAGTTGCTGCTCGACAAAATGGCGGTGGTATCTCTTGGCTATTCCCTTTTGTGGATGGTCATCCTCCGCTGGGATGGTCGGATACATTGGCTTACCTTGTATTGCCTGTGTTGCTGGTTATTGCGCAATACATCTCAATCCAAATTATGCAGACGTCACAGGCCAATAATGATCCAAACATGAAGAGTTCTCAAGCACTGACCAAGTTCCTTCCATTAATGATAGGCTACTTTTCTTTATCCGTTCCTTCTGGTCTAAGTCTTTATTGGTTTACCAATAATATTTTGAGCACAGCACAGCAAGTGTGGCTTCAAAAGTTGGGGGGTGCTCAAAATCCAGTGATGCCAAATATAATCAAGGACGACAAAATGAAGAGTCAGAAATCGGTGTCTAAATTAATTTCTTCCACAGTGGAGCCAAAAGGAGGAGAAAAGCTGACGTCAGAGGGAGTTAGACCTGGTGAAAGATTTAAAAAATTAAAGGAGGAAGAAGCAAGGAGAAGAAAACAAAGAGAAGAAGAAAAGAGGAAGGCTGAGGAGACAGCAGTTAGAGGATCTATAACAAATGATGGACATGAGAGAGGAGAGACCAGTATTATTAAAGAATCAGAATCTGTGACCCGCAGTCCTGATACAACCCCTTTGAACATTGTGAATGGTAATCTGTCCGGTCATAATCTTGATGATGAGAATCAAAATGTTTCATCCACGTTGAGGACGGGACAAGATGACTTTTCTAATAATGACGAGGCTGGGGGAAGAAGCGCCAAGGATTCCATTAAATCACTAGATAAGGAAACTGTAGAAGCATACACAAGTAGAAGTGCCACAGAAAACCAACTTTCCGGGGAAGAGGACCATTAG 1602 0.4457 MATLLSCGQSCIVLAPCSRRSRTVNPFLHRPQYGGVSYPSNKRFLQGSLSVVRLGYNSGFLPDPDGAEEAIRHLFGRVEGLIYTIADAAVSSSDTVPATTVPAKQSNDWLSGITSYMETVLKVLKDGLSTLHVPYAYGFAIILLTVLVKAVTFPLTKKQVESAMAMRSLQPQIKAIQQQYAGDQERIQLETARLYKLAGINPLAGCLPTLATIPVWIGLYRALSNVADEGLLTEGFFWIPSLAGPTTVAARQNGGGISWLFPFVDGHPPLGWSDTLAYLVLPVLLVIAQYISIQIMQTSQANNDPNMKSSQALTKFLPLMIGYFSLSVPSGLSLYWFTNNILSTAQQVWLQKLGGAQNPVMPNIIKDDKMKSQKSVSKLISSTVEPKGGEKLTSEGVRPGERFKKLKEEEARRRKQREEEKRKAEETAVRGSITNDGHERGETSIIKESESVTRSPDTTPLNIVNGNLSGHNLDDENQNVSSTLRTGQDDFSNNDEAGGRSAKDSIKSLDKETVEAYTSRSATENQLSGEEDH* 534
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte17g01204 533 Coils Coil 403 428 - -
Pte17g01204 533 NCBIfam membrane protein insertase YidC 137 352 IPR028055 -
Pte17g01204 533 CDD 5TM_YidC_Alb3 138 352 IPR047196 -
Pte17g01204 533 MobiDBLite consensus disorder prediction 382 533 - -
Pte17g01204 533 Pfam 60Kd inner membrane protein 137 352 IPR028055 -
Pte17g01204 533 MobiDBLite consensus disorder prediction 448 495 - -
Pte17g01204 533 MobiDBLite consensus disorder prediction 391 447 - -
Pte17g01204 533 MobiDBLite consensus disorder prediction 496 514 - -
Pte17g01204 533 PANTHER OXA1 88 414 IPR001708 GO:0016020|GO:0032977
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte17g01204 Pte-Chr17 26985144 26990746 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte17g01204 38 421 Chloroplast and Mitochondria Gene Families AT2G28800 52.972 4.83e-128 379
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte17g01204 K03217 - qsa:O6P43_023930 647.891