Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte17g01178 ATGCAAACTCCGAAGCTTAATTTGGAGAGGAGTATGGAGGCCTATGAAGTAATTAAAAACATAGGGTCAGGGAACTTTGGGGTGGCAAAGCTAGCAAGAAGTAAACGAACTGGTGAGCTCTATGCCATCAAGTTCATCGACAGAGGCCTCAAGATAGATGAACACGTGCAGCGGGAGATTATGAACCACAGATCATTGAAACATCCTAATATAATTAGATTTAAGGAGGTACTGCTCACTCCAAATCATCTTGCCATAGTAATGGAGTATGCTGCGGGAGGAGAACTTTTTGAAAGAATATGTAATGCTGGTAAATTTAGTGAGGATGAGGCAAGATATTTCTTTCAGCAGCTGATATCAGGAGTTAGCTACTGCCATTCAATGCAAATTTGCCATAGAGATCTTAAGCTGGAAAACACACTTTTAGATGGAAGCTCAGCACCAAGACTCAAAATATGTGACTTTGGTTATTCAAAGTCATCTGTGCTGCATTCTCAGCCCAAATCTACTGTAGGCACTCCCGCATACATTGCACCCGAGGTGTTATCTAGAAGAGAATATGATGGCAAGATTGCAGATGTTTGGTCTTGTGGGGTGACCTTGTATGTTATGCTTGTCGGGGCTTACCCTTTCGAAGATCCGGAGGATCCCAGAAATTTCAGAAAAACGCTCCAGCGTATTCTTAGTGTCCACTACAGTATTCCAGACTATGTTCGTATATCCGTGGAGTGTAGACATCTTCTATCTCGAATATTTGTGGCTAATCCTGAGAAGAGGATTACAATTCCGGAAATTAGAAACCACGTCTGGTTTCTGCAAAATTTGCCAGTAGAATTTATGGATGGAGAGGAAGTTGGTTTTCAAAACGATGTAAATGTGAATGATGCATCACAAAGTGTTGAAGAAATACTGTCTATAATTCAAGAGGCGAAGAAACCGACAGAGAGCCCAATTATTGGTGGGAAGTTTGATGGGGACAGCATGGAGATTGATGAGATAGATGCAGATGCTGACCTTGATGACGCAGAGACCAGCGGTGATTTTGTCTGTGCGCTATGA 1059 0.4212 MQTPKLNLERSMEAYEVIKNIGSGNFGVAKLARSKRTGELYAIKFIDRGLKIDEHVQREIMNHRSLKHPNIIRFKEVLLTPNHLAIVMEYAAGGELFERICNAGKFSEDEARYFFQQLISGVSYCHSMQICHRDLKLENTLLDGSSAPRLKICDFGYSKSSVLHSQPKSTVGTPAYIAPEVLSRREYDGKIADVWSCGVTLYVMLVGAYPFEDPEDPRNFRKTLQRILSVHYSIPDYVRISVECRHLLSRIFVANPEKRITIPEIRNHVWFLQNLPVEFMDGEEVGFQNDVNVNDASQSVEEILSIIQEAKKPTESPIIGGKFDGDSMEIDEIDADADLDDAETSGDFVCAL* 353
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte17g01178 352 PANTHER SERINE/THREONINE KINASE 14 298 - -
Pte17g01178 352 Pfam Protein kinase domain 15 271 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pte17g01178 352 SMART serkin_6 15 271 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pte17g01178 352 FunFam Serine/threonine-protein kinase SRK2E 91 279 - -
Pte17g01178 352 Gene3D Transferase(Phosphotransferase) domain 1 91 279 - -
Pte17g01178 352 ProSiteProfiles Protein kinase domain profile. 15 271 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pte17g01178 352 Gene3D Phosphorylase Kinase; domain 1 1 90 - -
Pte17g01178 352 FunFam Aurora kinase A 7 94 - -
Pte17g01178 352 ProSitePatterns Serine/Threonine protein kinases active-site signature. 130 142 IPR008271 GO:0004672|GO:0006468
Pte17g01178 352 CDD STKc_SnRK2 15 270 - -
Pte17g01178 352 SUPERFAMILY Protein kinase-like (PK-like) 7 298 IPR011009 -
Pte17g01178 352 ProSitePatterns Protein kinases ATP-binding region signature. 21 44 IPR017441 GO:0005524
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte17g01178 Pte-Chr17 26778991 26781726 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte17g01178 10 289 CBL-interacting serine-threonine protein kinases AT4G24400 43.253 2.78e-72 229
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_OST1L Pte17g01178 Pkinase 4.9e-71 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte17g01178 K14498 - zju:107425296 593.964