Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte17g01176 ATGGCGTTGAATATTCGTAGTGAGCAACTGCATCATCACGAGTCCAAACAGGAGGATCAAGATGCGCAGCCACAAAGAGAACCAGAGAAGAATTCTGTGGTTTCATTGGAAGGCCATTTTGCGCAGAGGAATGGTGTTTACCTGACATGGAACAAGCTTTGTGTGATTGTTTCCCGAGGCAAAAGCGAGACAAAGCCTATACTGCAGGAGCTTACAGGGTATGCCCAACCAGGCCAGGTACTGGCCATCATGGGTCCTTCTGGCTGCGGAAAAACTACACTTCTTGATGCAATAGCAGAAGTACTGAGACAAGTGCAATTTTGTACTCACAATATGTGGTCACAGGCATACATGACTCAGGATGACGCTCTCATGACAACGCTGACTGTTAAAGAAGCGATTTACTATTCAGCACAACTCCAGCTTCCAGATTCTATGTCGGTGAAAGAGAAGAGGGAGAGGGCAGATATGACTATAAGGGAAATGGGCCTGCAAGATGCGCAGGATACGAGGATCGGAGGGTGGAGCAGGAAAGGGCTGAGTGGTGGTCAGAAGAGAAGGGTTAGCATTTGCATTGAAATTTTGACACGCCCACAGCTTTTGTTCCTGGATGAGCCTACTAGTGGGTTAGACAGTGCAGCCTCTTACCATGTCATGAGCCGCATTGTTCATATCGCTGGCCAGAGTGGACTAACTGTCGTTGCATCTATCCATCAACCTAGTAGTGAAGTTTATGAGCTTTTCCACAATCTATGCCTTCTTTCATCTGGAAAAACAGTGTACTTTGGTCCTGCTGCCATGGCAGAACAGTTTTTTGCTTCAAATGGTTTCCCATGCCCTACTCATAGAAATCCATCTGATCATTATCTCAGAATAATCAATAAGGATTTTCAACTGCTTGGTGCTAAAATGAATGCCGAGGAAGCTATTGACAGTCTTACCAGTTCGTACATGATGTCAGAGACGTACCGGCAAGTCCAAAGTCGAGTTTCTGATATTAACAATCACCAAGGAAGTCCTCTACAAAAGAGGGGGACCCAAGCCAGCTTCGTAACCCAATCTCTCGTACTTACGAGGAGATCTTTCGTGAATATGTATCGTGACCTTGGCTACTACTGGCTTCGCCTTGCAGTTTACATTGCATTGTGCTTATGTATCGGCACAATCTTCCATGACATAGGCCATTCCTTTGGCTCAATTCAGGCTAGGGGTTCCATGCTGATGTTTGTTGCATCCTTCTTGACTTTCATGGCAATCGGCGGATTCCCCTCGTTTGTAGAAGACATGAAGATCTTCGGTCGGGAACGATTAAATGGCCATTATGGAGTTGGTGCATTTGTTGTTGGAAACACACTGTCCTCCATTCCTTATTTGCTCGTGATCTCTCTTATTCCCGGAGCAATTGCTTACTTCCTCGTAGGCCTGCAAAATAGTTTCGAACACTTCGCTTATTTCTGCTTGGCCCTTTTTGCATGCACGATGTTGGTCGAAAGCCTAATGATGATCGTCGCAAGCATAGTGCCGGATTTCCTCATGGGCATCATCACAGGAGCTGGCATTCAAGGCTTCATGATGTTGAACGGCGGCTTCTTCAGACTTCCGAACGATCTTCCTAAACCAGTTTGGAGATATCCTATGTACTACGTTGCATTTCATAAGTATGCCAATCAAGGATTTTACAAAAATGAGTTTGAGGGATTGACTTTCCCAAATAATCAAGCTGGAGGAGCCCCAACCATTAGTGGTCACGAGATTTTGAAAAACTTTTGGCAAATGGAGATGGGTTACTCAAAGTGGATTGATCTTGCCATTTTGCTGGGGATGGTGATTCTTTACCGATTGATGTTTTTGGGGATTCTGAAAATTGTCGAAAAGCTTCTGCCAATAATCAGAGGACTCCGGTCAAAGCAGTTCCTCGAATGTAGAATTGTAGATGCATGA 1941 0.4508 MALNIRSEQLHHHESKQEDQDAQPQREPEKNSVVSLEGHFAQRNGVYLTWNKLCVIVSRGKSETKPILQELTGYAQPGQVLAIMGPSGCGKTTLLDAIAEVLRQVQFCTHNMWSQAYMTQDDALMTTLTVKEAIYYSAQLQLPDSMSVKEKRERADMTIREMGLQDAQDTRIGGWSRKGLSGGQKRRVSICIEILTRPQLLFLDEPTSGLDSAASYHVMSRIVHIAGQSGLTVVASIHQPSSEVYELFHNLCLLSSGKTVYFGPAAMAEQFFASNGFPCPTHRNPSDHYLRIINKDFQLLGAKMNAEEAIDSLTSSYMMSETYRQVQSRVSDINNHQGSPLQKRGTQASFVTQSLVLTRRSFVNMYRDLGYYWLRLAVYIALCLCIGTIFHDIGHSFGSIQARGSMLMFVASFLTFMAIGGFPSFVEDMKIFGRERLNGHYGVGAFVVGNTLSSIPYLLVISLIPGAIAYFLVGLQNSFEHFAYFCLALFACTMLVESLMMIVASIVPDFLMGIITGAGIQGFMMLNGGFFRLPNDLPKPVWRYPMYYVAFHKYANQGFYKNEFEGLTFPNNQAGGAPTISGHEILKNFWQMEMGYSKWIDLAILLGMVILYRLMFLGILKIVEKLLPIIRGLRSKQFLECRIVDA* 647
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte17g01176 646 PANTHER ABC TRANSPORTER G FAMILY MEMBER 11 31 635 - -
Pte17g01176 646 MobiDBLite consensus disorder prediction 7 26 - -
Pte17g01176 646 Pfam ABC transporter 69 208 IPR003439 GO:0005524
Pte17g01176 646 MobiDBLite consensus disorder prediction 1 33 - -
Pte17g01176 646 FunFam Os10g0163290 protein 109 302 - -
Pte17g01176 646 Pfam ABC-2 type transporter 353 564 IPR013525 GO:0016020|GO:0140359
Pte17g01176 646 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 54 266 IPR027417 -
Pte17g01176 646 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 41 281 IPR003439 GO:0005524
Pte17g01176 646 SMART AAA_5 77 257 IPR003593 GO:0016887
Pte17g01176 646 Pfam ABC-2 type transporter 238 340 IPR043926 GO:0140359
Pte17g01176 646 ProSitePatterns ABC transporters family signature. 180 194 IPR017871 GO:0005524|GO:0016887
Pte17g01176 646 Gene3D - 49 295 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte17g01176 Pte-Chr17 26749726 26752993 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte17g01176 78 212 Calmodulin-binding Proteins AT2G36910 32.237 2.66e-08 55.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte17g01176 K05681 - pvy:116136480 930.243