Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte17g01173 ATGTGGTCACAGTCGTACGTGACTCAGGATGACACTCTCATGACAACGCTGACTGTTAAAGAAGCAATTTACTATTCAGCACAACTCCAGCTTTCGGATTCCATGTCGGTGAAAGAGAAGAGGGAGAGGGCAGATATGACTATAAGGGAAATGGGCCTGCAAGATGCACAAGATACGAGGATCGGAGGGTGGAGTAAGAAAGGGCTGAGTGGTGGTCAGAAGAGAAGGGTTAGCATTTGCATTGAAATTTTGACACGCCCACAACTTTTGTTCCTTGATGAGCCTACTAGTGGGTTAGACAGTGCAGCCTCTTACCATGTCATGAGCCGCATTGTTCATCTCGCTCGCCAGGATGGACTAACTGTCGTTGCATCTATCCATCAACCTAGTAGTGAAGTTTATGAGCTTTTCCACAATCTATGCCTTCTTTCATCTGGAAAAACAGTGTATTTTGGTCCTGCTGCCATGGCAGAACAGTTTTTTGCTTCAAATGGTTTCCCATGCCCTACTCATAGAAATCCGTCTGATCATTATCTCAAAATAATCAATAAGGATTTTCAACTGGATATCGAGCAGGGGCTTGGTGCTAAAATGAATGCCGAGGAAGCAATTGACAGTCTTACCAGTTCGTACAATATGTCAGAGACGTACCAACAAGTCCAAAGTCGAGTCTTTGATATTAACAATCACCAAGGAAGTCCTCTAGAAAAGAGGGGGACCCAAGCCAGCTTCGTAACCCAATCTCTTGTACTTACGAGGAGATCTTTCGTGAATATGTATCGTGACCTTGGCTACTATTGGCTTCGCCTTGCAATTTATATTGCATTGTGCTTATGCGTAGGCACAATCTTCCATGATATCGGCCATTCCTTTGGCTCAATTCAGGCTAGGGGTTCCATGCTGATGTTTGTTGCCGCCTTCTTGACTTTCATGGCAATTGGCGGATTTCCCTCATTTGTAGAAGACATGAAGATCTTCGGTCGGGAACGATTGAATGGCCATTACGGAGTTGGTGCATTTGTCGTTGGAAACACATTGTCCTCCATTCCTTATTTGCTTGTCATCTCTCTTATTCCCGGAGCAATTGCTTACTTCCTTGTAGGCCTGCAAAAGAGTTTCGAACACTTCGCTTATTTCTGCTTGGTCCTTTTCGCATGCATGATGTTGGTCGAAAGCCTAATGATGATTGTCGCAAGCATAGTGCCGGATTTCCTCATGGGCATCATCACAGGAGCTGGCATTCAAGGCGTCATGATGTTGAACGGCGGCTTTTTCAGACTTCCGGACGATATTCCTAAACCAGTTTGGAGATATCCTATGTACTACATTGCATTTCATAAGTATGCCAATCAAGGATTTTACAAAAATGAGTTTGAGGGATTGACTTTCCCAAATAATCAAGCTGGAGGAGCCCCTACCATTAGTGGTCACGAAATTTTGGAAAACTTTTGGCAAGTGGAGATGGGATACTCAAAGTGGATTGATCTTGCCATTTTGGTGGGGATGGTGATTCTCTACAGATTGATGTTTATGGGCATTGTGAAAATCATCGAAAAGGTTATGCCAATAATCAGAGGCCTCAAAGCAGCTCCCCGAATGTAG 1602 0.4413 MWSQSYVTQDDTLMTTLTVKEAIYYSAQLQLSDSMSVKEKRERADMTIREMGLQDAQDTRIGGWSKKGLSGGQKRRVSICIEILTRPQLLFLDEPTSGLDSAASYHVMSRIVHLARQDGLTVVASIHQPSSEVYELFHNLCLLSSGKTVYFGPAAMAEQFFASNGFPCPTHRNPSDHYLKIINKDFQLDIEQGLGAKMNAEEAIDSLTSSYNMSETYQQVQSRVFDINNHQGSPLEKRGTQASFVTQSLVLTRRSFVNMYRDLGYYWLRLAIYIALCLCVGTIFHDIGHSFGSIQARGSMLMFVAAFLTFMAIGGFPSFVEDMKIFGRERLNGHYGVGAFVVGNTLSSIPYLLVISLIPGAIAYFLVGLQKSFEHFAYFCLVLFACMMLVESLMMIVASIVPDFLMGIITGAGIQGVMMLNGGFFRLPDDIPKPVWRYPMYYIAFHKYANQGFYKNEFEGLTFPNNQAGGAPTISGHEILENFWQVEMGYSKWIDLAILVGMVILYRLMFMGIVKIIEKVMPIIRGLKAAPRM* 534
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte17g01173 533 FunFam Os10g0163290 protein 1 190 - -
Pte17g01173 533 Pfam ABC transporter 5 97 IPR003439 GO:0005524
Pte17g01173 533 Pfam ABC-2 type transporter 247 458 IPR013525 GO:0016020|GO:0140359
Pte17g01173 533 Pfam ABC-2 type transporter 127 191 IPR043926 GO:0140359
Pte17g01173 533 Gene3D - 3 162 IPR027417 -
Pte17g01173 533 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 5 155 IPR027417 -
Pte17g01173 533 PANTHER ABC TRANSPORTER G FAMILY MEMBER 11 4 528 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte17g01173 Pte-Chr17 26739543 26741638 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte17g01173 7 101 Calmodulin-binding Proteins AT2G36910 36.082 2.87e-06 48.5