Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte17g01171 ATGGCCATTACACCTGGCGGAAGTACGTCAATTGCTCAATGGGGAATACGTCCTCAATTTTTTCTGAGATCTTGTTCTACGTGCAAAGTCACAGCTCCCAGTTGCAGGGTGAATTTTACGGCATCAACAAGTTCAAGCTTACTCTGGGGGGATTCCGTACGTGCACTATTTGGCTCAGTTTCATACCAGACTTCACGTCCTAGAGGATCAAGGTTCATAGTTAGAGCAGATAGTGACTACTATTCCGTCCTTGGAGTTTCAAAAAATGCTAGCAAATCTGAGATCAAGAGCGCTTATCGGAAGCTTGCAAGGAGCTATCACCCAGATGTGAACAAAGAAACTGGGGCTGAACAGAAATTTAAGGAAATAAGCAATGCATATGAGGTCTTGTCAGATGATGAGAAACGATCTATCTATGATAGATATGGGGAGGCTGGGCTTAAAGGTTCTGGCATGGGCATGGGGGATTTCAGCAATCCTTTTGATCTGTTTGAGACGCTATTCGAGGGCTTTGGTGGTGCTGGGATGGGGAGCAGAGGATCTTGGAATGGAGCAGTTGACGGAGAAGATGAATATTACAGCCTTGTCTTGAACTTTAAGGAAGCAGTTTTTGGAGTTGAAAAAGAGATCGAGATAAGACGACTAGAGAACTGTAGCACTTGTAATGGTTCAGGGGCGAAGCCCGGAACTCAACCATCTAGATGTAGCACCTGTGGGGGTCAAGGCCGTGTGGTCTCTTCAACGAGGACTCCGTTAGGTGTCTTCCAGCAGTCGATGACATGCTCTACATGCCGTGGTGCTGGAGAAATTTCCACACCTTGCAACACGTGTTCCGGAGATGGTAGAGTGAGGAAGACTAAGCGGATAAGTCTCAAAGTTCCAGCTGGTGTGGACTCCGGTAGCCGTCTAAGGGTCCGAAATGAAGGAAATGCTGGAAGGCGTGGTGGTTCTCCTGGGGACCTTTTCGTGGTCATTGAAGTTATCCCTGATCCTGTCTTAAAACGTGATGATACCAACATATTATACACTTGTAAGGTCTCGTACATTGATGCCATCCTGGGGACTACAATTAAGGTCCCAACTGTGGATGGCATGGTTGATCTGAAAATCCCAGCAGGGACTCAGCCAAACACTACACTGGTTATGGCAAGAAAAGGTGTCCCCCTTCTGAACAAAAGCAATATGAGGGGAGATCAGTTGGTAAGAGTGCAAGTTGAAATCCCCAAAAGATTGAGCAGTGAAGAGAGGAAGCTTGTTGAAGAACTTGCTGATCTAAGTAAAGACAAGACGGCTACGGCAAGAAGATGA 1308 0.4648 MAITPGGSTSIAQWGIRPQFFLRSCSTCKVTAPSCRVNFTASTSSSLLWGDSVRALFGSVSYQTSRPRGSRFIVRADSDYYSVLGVSKNASKSEIKSAYRKLARSYHPDVNKETGAEQKFKEISNAYEVLSDDEKRSIYDRYGEAGLKGSGMGMGDFSNPFDLFETLFEGFGGAGMGSRGSWNGAVDGEDEYYSLVLNFKEAVFGVEKEIEIRRLENCSTCNGSGAKPGTQPSRCSTCGGQGRVVSSTRTPLGVFQQSMTCSTCRGAGEISTPCNTCSGDGRVRKTKRISLKVPAGVDSGSRLRVRNEGNAGRRGGSPGDLFVVIEVIPDPVLKRDDTNILYTCKVSYIDAILGTTIKVPTVDGMVDLKIPAGTQPNTTLVMARKGVPLLNKSNMRGDQLVRVQVEIPKRLSSEERKLVEELADLSKDKTATARR* 436
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte17g01171 435 ProSiteProfiles dnaJ domain profile. 79 143 IPR001623 -
Pte17g01171 435 NCBIfam molecular chaperone DnaJ 79 424 IPR012724 GO:0005524|GO:0006457|GO:0009408|GO:0051082
Pte17g01171 435 PRINTS DnaJ domain signature 99 114 IPR001623 -
Pte17g01171 435 PRINTS DnaJ domain signature 81 99 IPR001623 -
Pte17g01171 435 PRINTS DnaJ domain signature 115 135 IPR001623 -
Pte17g01171 435 PRINTS DnaJ domain signature 135 154 IPR001623 -
Pte17g01171 435 Gene3D - 218 281 - -
Pte17g01171 435 SMART dnaj_3 78 135 IPR001623 -
Pte17g01171 435 SUPERFAMILY HSP40/DnaJ peptide-binding domain 333 419 IPR008971 GO:0006457|GO:0051082
Pte17g01171 435 FunFam Chaperone protein dnaJ A6 chloroplastic 76 180 - -
Pte17g01171 435 SUPERFAMILY DnaJ/Hsp40 cysteine-rich domain 205 285 IPR036410 -
Pte17g01171 435 Gene3D - 188 323 - -
Pte17g01171 435 SUPERFAMILY HSP40/DnaJ peptide-binding domain 186 341 IPR008971 GO:0006457|GO:0051082
Pte17g01171 435 ProSitePatterns Nt-dnaJ domain signature. 120 139 IPR018253 -
Pte17g01171 435 FunFam Chaperone protein dnaJ 1, mitochondrial 328 435 - -
Pte17g01171 435 Pfam DnaJ domain 79 140 IPR001623 -
Pte17g01171 435 Gene3D - 328 435 - -
Pte17g01171 435 ProSiteProfiles Zinc finger CR-type profile. 205 286 IPR001305 GO:0031072|GO:0051082
Pte17g01171 435 CDD DnaJ_zf 218 281 IPR001305 GO:0031072|GO:0051082
Pte17g01171 435 FunFam Molecular chaperone DnaJ 210 286 - -
Pte17g01171 435 Pfam DnaJ C terminal domain 193 408 IPR002939 -
Pte17g01171 435 CDD DnaJ 79 132 IPR001623 -
Pte17g01171 435 Gene3D DnaJ domain 76 180 IPR036869 -
Pte17g01171 435 CDD DnaJ_C 189 411 - -
Pte17g01171 435 FunFam Putative Mitochondrial DnaJ chaperone 274 323 - -
Pte17g01171 435 PANTHER DNAJ HOMOLOG 1, MITOCHONDRIAL-RELATED 42 431 - -
Pte17g01171 435 Hamap Chaperone protein DnaJ [dnaJ]. 76 429 IPR012724 GO:0005524|GO:0006457|GO:0009408|GO:0051082
Pte17g01171 435 SUPERFAMILY Chaperone J-domain 76 177 IPR036869 -
Pte17g01171 435 Pfam DnaJ central domain 218 281 IPR001305 GO:0031072|GO:0051082
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte17g01171 Pte-Chr17 26715979 26718669 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte17g01171 80 142 C2H2 Transcription Factor Family AT1G74250 44.928 1.14e-09 58.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte17g01171 K03686 - gmx:100792363 712.99