Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte17g01168 ATGCTCCTTGGGCTGGGAATGATGTTATTCAAAATGAATCTTATTCTTTTGCTCTTGGTATTAACTGGCGTGCATTCACTAGTCTCATCGGATTCCCAAGGAGATGCACTTTTTGCGTTGAGGAACTCATTAAATGCCTCATCTGATCAGCTGACAGATTGGAACCCTTATCAAGTAAACCCGTGCACTTGGTCACGCGTTTACTGTGATCCTAACAATTATAATGTTGTTTCAGTTTCATTGGCATTTATGGGTTTTACAGGGGTCTTGACTCCCAGGATAGGTTCTCTGCAGGCCCTGGCAACTCTTTCATTACAAGGAAATAAAATCACCGGTGAGATACCCGAAGAGTTAGGAAACTTGACAAGCTTAGTCAGGTTGGACTTAGAAAACAATAGGTTGACTGGGGAAATACCATCTTCCCTCGGCAATCTCAAGAAGCTTCAGTTTTTGACTTTGAGTCAAAACAATCTCAGCGGAAAACTTCCTGATTCTCTTGCAAGTATCCCAAGCCTAATCAATGTTTTGGTTGATTCCAATGATCTCAGTGGCCCAATTCCTGCAGGTTTATTTGAAGTTGCAAAATACAATTTTACAGGAAATAAATTAATCTGTGGCATAAACTACCACCACCCTTGTGCATCTGATAGTACAGATGGAGGTTCTTCAAACAAACCAAAAATTGGTGTCATAGTTGGAAGTGTTGGAGGGTTGCTAGTCATTATTTTGCTTGGCAGTGTATTGTTCTTCTTGTGTAAGAATAGGCACAAAGGCTATAAGCGTGAAGTTTTTGTTGATGTTGCAGGTGAAGTTGATCGTAGAATTGCATTTGGTCAATTGAAACGATTTGCATGGAGAGAACTGCAGTTAGCTACAGACAATTTCAATGAGAAAAATGTTTTAGGGCAGGGAGGTTTTGGAAAAGTTTACAAAGGAGTGCTGGCTGATGGCACAAAAGTTGCTGTTAAACGTTTAACTGATTATGAAAGTCCTGGGGGAGATGCAGCTTTTCAGCGTGAGGTTGAGATGATAAGCGTTGCCGTTCACAGGAATTTGTTGCGTCTTATTGGATTTTGCACGACTACAACAGAACGCCTTTTAGTGTACCCTTTCATGCAGAACCTAAGCGTTGCCTATCGGCTAAGAGAAATTAAACCTGGGGAACCTGCTCTGGATTGGCCTACAAGAAAAAGAGTGGCTCTGGGAACAGCTCGTGGTTTGGAATATCTTCATGAACATTGCAATCCTAAGATTATCCACCGCGATGTTAAGGCAGCAAATGTTTTGCTGGACGAAGATTTTGAAGCAGTTGTTGGTGATTTTGGTCTGGCAAAGTTAGTTGATGTCCGAAAAACTAATGTGACAACCCAAGTTCGTGGGACTATGGGCCACATAGCTCCGGAATACCTGTCCACTGGGAAATCTTCAGAGAGGACAGATGTTTTTGGTTACGGTATTATGCTTCTAGAGCTTGTCACAGGTCAACGTGCTATTGACTTCTCACGTTTGGAAGAGGAAGATGATGTTTTATTGCTTGACCATGTGAGTTAG 1551 0.4178 MLLGLGMMLFKMNLILLLLVLTGVHSLVSSDSQGDALFALRNSLNASSDQLTDWNPYQVNPCTWSRVYCDPNNYNVVSVSLAFMGFTGVLTPRIGSLQALATLSLQGNKITGEIPEELGNLTSLVRLDLENNRLTGEIPSSLGNLKKLQFLTLSQNNLSGKLPDSLASIPSLINVLVDSNDLSGPIPAGLFEVAKYNFTGNKLICGINYHHPCASDSTDGGSSNKPKIGVIVGSVGGLLVIILLGSVLFFLCKNRHKGYKREVFVDVAGEVDRRIAFGQLKRFAWRELQLATDNFNEKNVLGQGGFGKVYKGVLADGTKVAVKRLTDYESPGGDAAFQREVEMISVAVHRNLLRLIGFCTTTTERLLVYPFMQNLSVAYRLREIKPGEPALDWPTRKRVALGTARGLEYLHEHCNPKIIHRDVKAANVLLDEDFEAVVGDFGLAKLVDVRKTNVTTQVRGTMGHIAPEYLSTGKSSERTDVFGYGIMLLELVTGQRAIDFSRLEEEDDVLLLDHVS* 517
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte17g01168 516 Pfam Protein kinase domain 295 498 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pte17g01168 516 Gene3D Phosphorylase Kinase; domain 1 264 371 - -
Pte17g01168 516 SUPERFAMILY Protein kinase-like (PK-like) 275 503 IPR011009 -
Pte17g01168 516 SUPERFAMILY L domain-like 31 202 - -
Pte17g01168 516 FunFam Somatic embryogenesis receptor kinase 1 264 371 - -
Pte17g01168 516 SMART serkin_6 295 511 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pte17g01168 516 PANTHER SOMATIC EMBRYOGENESIS RECEPTOR KINASE 1 13 504 - -
Pte17g01168 516 Pfam Leucine rich repeat N-terminal domain 31 70 IPR013210 -
Pte17g01168 516 ProSitePatterns Protein kinases ATP-binding region signature. 301 323 IPR017441 GO:0005524
Pte17g01168 516 ProSiteProfiles Protein kinase domain profile. 295 516 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pte17g01168 516 ProSitePatterns Serine/Threonine protein kinases active-site signature. 418 430 IPR008271 GO:0004672|GO:0006468
Pte17g01168 516 Gene3D Transferase(Phosphotransferase) domain 1 372 516 - -
Pte17g01168 516 Gene3D Ribonuclease Inhibitor 30 215 IPR032675 -
Pte17g01168 516 Pfam Leucine Rich Repeat 123 145 IPR001611 GO:0005515
Pte17g01168 516 FunFam Somatic embryogenesis receptor-like kinase 1 372 516 - -
Pte17g01168 516 FunFam Putative LRR receptor-like serine/threonine-protein kinase 30 215 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte17g01168 Pte-Chr17 26688084 26693278 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte17g01168 9 515 Receptor kinase-like Gene Family AT5G10290 75.542 0.0 752
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-II Pte17g01168 Pkinase 3.4e-41 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte17g01168 - - qsa:O6P43_030475 811.216