Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte17g01147 ATGTCTCTGCATGCTGTGTCTCTGGACTTTGCTGCAGGACTAATTCCTATGCAAAATACAAGTAAACAGTACTACTGGACTGGGAAGCACCTAGCATGGGGTGGAAAGCTGAGACTAGTGTCATGTTGTAATGCTGAAAGCCACGACAAGGTGGCAGTGTTCGAAAAGAAGACCAACTTCTACGAGGTGCTTTCTCTAGGCTCTGCAAATGTTGGGTTGGAGGAGATTAAGAAAGCCTACAGAAGCATGGCACTTCGGTACCACCCTGATGTTTGTTCTAACTCTTGTTTTTCGAAAGATGAGTTGACCAGAAGATTCGTGCAGGTCCAAAAGGCTTATGAAACCCTTTCTGACCCTGTCTCACGAAGTATGCACGATTATGAGTTGGGGTTGATTGGTAATCATTCAATTGGTTTCATGGGAAGTTCCGTTTACAGTACTGAATGGGACGAAGAAATCAGAAGGCATAACTTTCCCAAACATGTTTGGGAAAGGCAACTCTGTGGGCTCAGAGAAAGGTCCAAAGTCAGAATGGAGAGGAAAAGATAG 549 0.4463 MSLHAVSLDFAAGLIPMQNTSKQYYWTGKHLAWGGKLRLVSCCNAESHDKVAVFEKKTNFYEVLSLGSANVGLEEIKKAYRSMALRYHPDVCSNSCFSKDELTRRFVQVQKAYETLSDPVSRSMHDYELGLIGNHSIGFMGSSVYSTEWDEEIRRHNFPKHVWERQLCGLRERSKVRMERKR* 183
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte17g01147 182 SMART dnaj_3 58 121 IPR001623 -
Pte17g01147 182 Pfam DnaJ domain 59 126 IPR001623 -
Pte17g01147 182 ProSiteProfiles dnaJ domain profile. 59 129 IPR001623 -
Pte17g01147 182 PRINTS DnaJ domain signature 62 80 IPR001623 -
Pte17g01147 182 PRINTS DnaJ domain signature 80 95 IPR001623 -
Pte17g01147 182 PRINTS DnaJ domain signature 101 121 IPR001623 -
Pte17g01147 182 SUPERFAMILY Chaperone J-domain 53 129 IPR036869 -
Pte17g01147 182 Gene3D DnaJ domain 46 140 IPR036869 -
Pte17g01147 182 CDD DnaJ 59 118 IPR001623 -
Pte17g01147 182 PANTHER CHAPERONE PROTEIN DNAJ 20 CHLOROPLASTIC 51 181 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte17g01147 Pte-Chr17 26513017 26513565 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte17g01147 61 126 C2H2 Transcription Factor Family AT1G74250 40.299 4.88e-07 47.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte17g01147 - - csin:114320189 155.992