Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte17g01146 ATGGACGAAGTCCTGCTTGGATTTCTGGTGGATTTCCTCTCCCATGCTGCCCTTGTTGGGTTTGTGGCAGGAGCCGCTATCACCATTGGTCTTCAACAACTGAAAGGACTGCTTGGAATAAGTCATTTCACGAACAAAACTGATATAATCTCTGTGGCCAAAGCCGTTGAAGGATCTATTGGACATACATGGGATCCTCGCGGTTTCATCCTTGGAACTGCATTCATGATCTTCATCCTAATTTCTAGATTTGTTGGTACAAGGACGAAGAAACTCTTCTGGTTACCAGCTATTGCTCCTCTTTTATCTGTCATACTATCCACTCTAGCAGTTTACGTTACAAGAGCTGACAAAAAGGGAGTTGACATAGTCAAACATATCAAGGCTGGACTGAATCCAATCTCAATCCAAGAGCTACAATTCAATGGCCCTAATGTTGGGGAAGTCGCGAAAATCGGATTGCTTGCAGCCATTGTTGCCCTAACTGAATCAGTTGCTGTTGGCAGGTCTTTTGCATCAATCAGTGGATACCACCTTGATGGGAACAAAGAAATGTTATCATTAGGATTTATGAACATGATTGGTTCCTTCACATCTTGCTATGTAGCAACCGGATCATTCTCACGTACAGCAGTGAATCACAGTGCTGGCTGTCAAACATTAGTGTCGAACCTTGTGATGGCCGTGACTGTGCTCATATGCTTAAAATTTTTTGCCTGCCTCTTGTATTTTACTCCAAAAGCTGTTCTTGCATCCATAATCCTTTCTGCATTGCCGGGACTCATAGACTTCAATGAAGCTCGCAGAATCTGGAGAATTGATAAACTAGATTTCCTTGCATGCATCGGGGCCTTCTTTGGGGTCATGTTTGCATCTGTGGAGATGGGTCTTCTTGTTGCGGTGGCGATATCATTTGCAAAGATCATTCTCATCTCAATCAGACCTGATACGGGGACGCTGGGGAAAATACCTGGAACTGAACATATATTTTGTGATGTCGAACAGTATCCCCTGGCTTCTAAGCTTCCTGGGATTGTGATCATACAATTTAAATCTCCCTTCCTTTGTTTTGCGAATGCCAATTTCGTAAGGGGAAGAATTGCGAAAAGGGTCGCCAAGGAGGAAGCAGAGGCCAGTAAAGGAAATGACGGCAGATCTATTCAGCTAGTAATCCTTGACATTTCTAATTTGGTCAGCATTGACACATCTGGGATTGCTGCACTAGAGGAACTGTACAACAATTTGTTGACGAATGGAAAGAAGTTAGCCATAGCCAACCCCAGGTGGCAAGTGATTCACAAGCTGAAGTTATCCAACTTTGTGAATAAAATTGAAGGAAGAGTCTTTATGACTATTGCAGAAGCTGTAATTGGATGCAAGGGTCAGTACTAA 1392 0.4318 MDEVLLGFLVDFLSHAALVGFVAGAAITIGLQQLKGLLGISHFTNKTDIISVAKAVEGSIGHTWDPRGFILGTAFMIFILISRFVGTRTKKLFWLPAIAPLLSVILSTLAVYVTRADKKGVDIVKHIKAGLNPISIQELQFNGPNVGEVAKIGLLAAIVALTESVAVGRSFASISGYHLDGNKEMLSLGFMNMIGSFTSCYVATGSFSRTAVNHSAGCQTLVSNLVMAVTVLICLKFFACLLYFTPKAVLASIILSALPGLIDFNEARRIWRIDKLDFLACIGAFFGVMFASVEMGLLVAVAISFAKIILISIRPDTGTLGKIPGTEHIFCDVEQYPLASKLPGIVIIQFKSPFLCFANANFVRGRIAKRVAKEEAEASKGNDGRSIQLVILDISNLVSIDTSGIAALEELYNNLLTNGKKLAIANPRWQVIHKLKLSNFVNKIEGRVFMTIAEAVIGCKGQY* 464
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte17g01146 463 CDD STAS_SulP_like_sulfate_transporter 336 452 - -
Pte17g01146 463 Gene3D STAS domain 314 462 IPR036513 -
Pte17g01146 463 Pfam STAS domain 336 455 IPR002645 -
Pte17g01146 463 Pfam Sulfate permease family 6 282 IPR011547 GO:0016020
Pte17g01146 463 ProSiteProfiles STAS domain profile. 355 459 IPR002645 -
Pte17g01146 463 PANTHER SULFATE TRANSPORTER 6 457 IPR001902 GO:0016020|GO:0055085
Pte17g01146 463 NCBIfam sulfate permease 6 451 IPR001902 GO:0016020|GO:0055085
Pte17g01146 463 SUPERFAMILY SpoIIaa-like 340 456 IPR036513 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte17g01146 Pte-Chr17 26507177 26512244 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte17g01146 6 461 Inorganic Solute Cotransporters AT5G10180 63.457 0.0 582
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte17g01146 K17469 - gmx:100781327 652.514