Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Pte17g01136 | ATGTCCAAGTTATCAGAGCTAGTGATGAACTTATTATGCAAGATACTTATGTTGTTAATTCTTGGAATGGTGGAAATCTGTCATCTACTGAAAGCAGCCTCCGAATTCAAACACAGGTTGAAGGGCACTAGACGCAGAATCGAAACCATCAGACACCTGAAAGTCATCGAGAAGAAGAGTCCTACAATCCGTTACACCAAGGAAATGGGGTGTGTAAAACAACCAGTGCCTCACGAGTGCAGGGTCTGCTTCTCAGAGTTCGAGGAAGGTGAGAAAATCAGGAAGCTGCAATGTAATCACATATACCACAAAGAATGTTTGGATAATTGGTTGCGGCTATGGCCTACTTGCCCGCTCTGCAGGTTTAAGATTTTACCAGAAGATGTTGCGACCAAGCACCGTAATGAGCAGATAGCGGCAATCCTGGAATTTGAGGTCTATGAGGAAATACCTTTTCTTGCTGCCATCTTTACCTGGTGGTAA | 483 | 0.4389 | MSKLSELVMNLLCKILMLLILGMVEICHLLKAASEFKHRLKGTRRRIETIRHLKVIEKKSPTIRYTKEMGCVKQPVPHECRVCFSEFEEGEKIRKLQCNHIYHKECLDNWLRLWPTCPLCRFKILPEDVATKHRNEQIAAILEFEVYEEIPFLAAIFTWW* | 161 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Pte17g01136 | 160 | ProSiteProfiles | Zinc finger RING-type profile. | 80 | 121 | IPR001841 | - | |
Pte17g01136 | 160 | PANTHER | - | 1 | 148 | - | - | |
Pte17g01136 | 160 | CDD | RING-H2_PA-TM-RING | 79 | 121 | - | - | |
Pte17g01136 | 160 | SUPERFAMILY | RING/U-box | 79 | 127 | - | - | |
Pte17g01136 | 160 | Pfam | Ring finger domain | 79 | 121 | IPR001841 | - | |
Pte17g01136 | 160 | SMART | ring_2 | 80 | 120 | IPR001841 | - | |
Pte17g01136 | 160 | Gene3D | Zinc/RING finger domain, C3HC4 (zinc finger) | 36 | 126 | IPR013083 | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Pte17g01136 | Pte-Chr17 | 26454090 | 26454572 | Dispersed/Wgd |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Pte17g01136 | 52 | 128 | C3H Transcription Factor Family | AT2G04240 | 41.250 | 1.16e-15 | 68.6 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Pte17g01136 | K16282 | - | gmx:102661897 | 121.709 |