Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Pte17g01131 | ATGAATTCTCCACATATGCAATTTGTCTCCTCAAGAAGAATGAGTATGTATGAGCCTCTCCACCAAATTAGTACGTGGGGAGAAAACTTCAAAAGTAATGTTAATATGACCGCATCTGTGACCATAATTGGAGAGGCTGACATGAAATTTGATACTCAGTCAGAGAATGCTTCTCAGGGAACTCAAGGACGTCCTCACAAATTTGATAAAGAAGCAACTAGAAGCATAGATAAGATACAGAGACGCCTTGCACAAAATAGGGAAGCTGCCCGTAAGAGTCGTCTAAGGAAAAAGGCCTATGTTCAGAAATTAGAAACAAGCCGTTTACAACTGATCCAGTTAGAGCAGAAACTAGAGCAAGCTAGACATCAGCAGGGGGTGACAACATTCGAGATGAAGTACGGTCTTTGGGTTGAAGAACAAAATAGACAGACTTGTGAGCTGAGGGATTGTTTAGATAGTCATATTGATGATGCACAACTACGGATGCTTGTACAAAGTATTATGGATCACTATTATAAACTCTTTGGAATGAAATCAACTGCTGCAAAAGCTGATGTTTTCAATGTAATGTCTGGTATGTGGAAAACCACAGCCGAATGGTTTTTCCTGTGGATTGGAGGGTTTCGTCCGTCAGAGCTTCTTAAGATTGTTATGCCTCAAATGGACACACTGACAGATGAACAACTTTTGGATGTTTGTACCCTTAGACAATCGTGTGAGCAAGCAGAAGATGCACTTTCACATGGAATGGATAAACTTCGACAAACCCTGTCTGAGATAGTAGCAGTCACTCAAATGGTTGGAGGAACTTACACCCCGCAGATTGCAATTGCCATGGACAAGTTGGAAGCTTTGGCGAGCTTTGTGAACCAGGCCGACCATCTTCGACAGGAAACTATGCAGCAGATGCAGCGAATCCTTACAGTTCGTCAGGCAGCCAAGTGCTTGCTCGCTTTGGGGGAATACTTTCAAAGGCTTCGGGAATTGAGTTCACTTTGGGCCGATCGTCGTCATGAACTTGCTTGCCGATTGTGA | 1038 | 0.4306 | MNSPHMQFVSSRRMSMYEPLHQISTWGENFKSNVNMTASVTIIGEADMKFDTQSENASQGTQGRPHKFDKEATRSIDKIQRRLAQNREAARKSRLRKKAYVQKLETSRLQLIQLEQKLEQARHQQGVTTFEMKYGLWVEEQNRQTCELRDCLDSHIDDAQLRMLVQSIMDHYYKLFGMKSTAAKADVFNVMSGMWKTTAEWFFLWIGGFRPSELLKIVMPQMDTLTDEQLLDVCTLRQSCEQAEDALSHGMDKLRQTLSEIVAVTQMVGGTYTPQIAIAMDKLEALASFVNQADHLRQETMQQMQRILTVRQAAKCLLALGEYFQRLRELSSLWADRRHELACRL* | 346 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Pte17g01131 | 345 | FunFam | BZIP family transcription factor | 77 | 127 | - | - | |
Pte17g01131 | 345 | Gene3D | - | 77 | 130 | - | - | |
Pte17g01131 | 345 | ProSitePatterns | Basic-leucine zipper (bZIP) domain signature. | 81 | 96 | IPR004827 | GO:0003700|GO:0006355 | |
Pte17g01131 | 345 | SMART | brlzneu | 73 | 138 | IPR004827 | GO:0003700|GO:0006355 | |
Pte17g01131 | 345 | ProSiteProfiles | DOG1 domain profile. | 127 | 337 | IPR025422 | GO:0006351|GO:0043565 | |
Pte17g01131 | 345 | Pfam | Seed dormancy control | 145 | 219 | IPR025422 | GO:0006351|GO:0043565 | |
Pte17g01131 | 345 | SUPERFAMILY | Leucine zipper domain | 78 | 120 | IPR046347 | GO:0003700|GO:0006355 | |
Pte17g01131 | 345 | ProSiteProfiles | Basic-leucine zipper (bZIP) domain profile. | 76 | 120 | IPR004827 | GO:0003700|GO:0006355 | |
Pte17g01131 | 345 | Coils | Coil | 97 | 124 | - | - | |
Pte17g01131 | 345 | PANTHER | TRANSCRIPTION FACTOR TGA9 | 2 | 339 | - | - | |
Pte17g01131 | 345 | Pfam | bZIP transcription factor | 78 | 112 | IPR004827 | GO:0003700|GO:0006355 |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Pte17g01131 | Pte-Chr17 | 26433153 | 26436645 | Dispersed/Wgd |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Pte17g01131 | 1 | 340 | Calmodulin-binding Proteins | AT5G65210 | 61.749 | 3.51e-160 | 451 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
TF | bZIP | Pte17g01131 | DOG1 | 8.5e-28 | No_clan |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Pte17g01131 | K14431 | - | gmx:100793353 | 464.151 |