Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte17g01124 ATGGACCTTGGCTCGAACTTTCTCTCCGGTACAGTCTTCTTTGATACAAGGCAAGCCGCTTTACGACCATTTTTTCGATCGTACGTGTTTACTCAGAGCAATACTGGTTACACCAATTCTACCAGAACCAGTTTCCGCTTTAATGTCAGAAAAGCAAAGCACAATATTTCAGCTCAGTCATCAGCCGTCACTGTAGAAACCTCGGCATCGAAAGCTTCAACTGAGGAGGACATAGAATCTTTGTTTTCAGATACTAGTGTCGATGAGTTTGAGCGGAAACGTGGGAGTAAGCAAACGAATACGGGTGCTTCTGGGATTTCCTCTGGTGTTAAGTTAGAGAATATAATAAAGGTTTATAAGGGTGTTACTGTATTGAAAGACGTGAGTTGGGAAGTTAAGAAAGGAGAGAAAGTGGGATTGGTGGGTGTGAATGGTGCTGGCAAGACCACCCAATTGAGAATCATTTCGGGTCAGGAAGAACCTGATGGGGGCAATGTGATAAAAGCAAAATCAAATATGAAAATTGCTTTTTTGAATCAGGAATTCGAGGTGTCAATGAGCAGGACAGTGAGGGAGGAGTTTATGAGTGCGTTTAAGGAGGAAATGGAAGTAGCATCCAAGTTGGAGAGAGTGCAGAAGGCATTAGAGGGCGCTGTAAATGATTTGGACCTCATGGGAAGGCTTTTAGATGAGTTTGATTCCCTTCAGAGGAAAGCACAAGCAGTTGATTTGGATGAAGTGGATGCCAAAATTAGTAAATTGATACCTGAACTTGGGTTTACTTCTGAGGATTCCGACAGGTTGGTAGCTTCTTTTAGCAGTGGGTGGCAGATGAGAATGTCCCTTGGAAAGATATTACTTCAGGAGCCTGATTTGTTACTGTTGGACGAGCCAACAAATCACCTTGACCTTGACACTATTGAGTGGCTTGAAGGTTATCTCAAAAAGCAGGATGTGCCTATGGTTATAATCTCACATGACAGAGCTTTTCTTGATCAGCTATGTACAAAAATTGTGGAGACTGACATGGGTGTTTCCAGAACGTTTGATGGAAATTATTCCCAGTATATTATTTCTAAAGCAGCATGGATTGAAGCACAGAATGTTGCTTGGGAGAAGCAGCAGAAAGAAATTGAACAAACCAAAGACTTGATCAACAGATTAGGTGCTGGAGCAAATTCTGGTCGGGCTTCTACTGCTGAGAAGAAGCTGGAAAAACTTCAGGACAAGGAGCTAGTAGAGAAGCCATTTCAACGCAAACAAATGAAAATCAGGTTCCCAGAGCGTGGAAACAGTGGAAGAAGTGTTGTGACAGTTAACAATTTAGAATTTGGCTTTGAGGATAAGGTGCTTTTTAAAGGGGCAAATCTTACAATTGAAAGGGGTGAGAAAATTGCCGTTCTTGGTCCAAATGGATGTGGAAAGAGTACCTTGCTTAAACTTATAATGGGCGTGATAAAACCAAGAAGAGGGGAAATTGTACTTGGGGAGCATAATGTATTACCAAACTATTTTGAGCAAAATCAGGCTGAAGCACTTGATCTGGATAAGACAGTGCTTGAAACAGTAGAGGAAGTTGCAGAGGATTGGAGAATTGATGATATCAAGGGTCTTCTTGGGCGTTGTAATTTTAAATCAGAAATGCTTGACAGAAAAGTTTCCTTTTTAAGTGGTGGTGAGAAGGCACGCTTGGCTTTCTGCAAATTCATGGTGAAACCATCGACCCTGCTAGTTCTGGACGAACCAACTAACCATTTGGATATACCTTCAAAGGAAATGCTTGAGGAGGCGATATCGGAGTATCAGGGCACTGTGATTACGGTCTCTCATGACAGATATTTTATAAAGCAAATTGTTAACAGAGTTGTTGAAGTTAAAGACTCCAATCTACAGGATTACTCTGGAGACTATAATTATTATCTGGAGAAAAATCTTGATGCACGGCGAAGAGAGCTAGAGCGCGAGGCAGCACTTGAGGAAAAAGCCCCCAAATTGAAAGCAAAATCCAAGATGTCAAAGGCTGAGAAAGAAGCTAGGAAGAAACAGAAAATGCAGGCATTTCAAGCTGCCAAGCAAAAGTCTAAAGGGACCAAAAATGCTAAGAGATGGAACTGA 2115 0.417 MDLGSNFLSGTVFFDTRQAALRPFFRSYVFTQSNTGYTNSTRTSFRFNVRKAKHNISAQSSAVTVETSASKASTEEDIESLFSDTSVDEFERKRGSKQTNTGASGISSGVKLENIIKVYKGVTVLKDVSWEVKKGEKVGLVGVNGAGKTTQLRIISGQEEPDGGNVIKAKSNMKIAFLNQEFEVSMSRTVREEFMSAFKEEMEVASKLERVQKALEGAVNDLDLMGRLLDEFDSLQRKAQAVDLDEVDAKISKLIPELGFTSEDSDRLVASFSSGWQMRMSLGKILLQEPDLLLLDEPTNHLDLDTIEWLEGYLKKQDVPMVIISHDRAFLDQLCTKIVETDMGVSRTFDGNYSQYIISKAAWIEAQNVAWEKQQKEIEQTKDLINRLGAGANSGRASTAEKKLEKLQDKELVEKPFQRKQMKIRFPERGNSGRSVVTVNNLEFGFEDKVLFKGANLTIERGEKIAVLGPNGCGKSTLLKLIMGVIKPRRGEIVLGEHNVLPNYFEQNQAEALDLDKTVLETVEEVAEDWRIDDIKGLLGRCNFKSEMLDRKVSFLSGGEKARLAFCKFMVKPSTLLVLDEPTNHLDIPSKEMLEEAISEYQGTVITVSHDRYFIKQIVNRVVEVKDSNLQDYSGDYNYYLEKNLDARRRELEREAALEEKAPKLKAKSKMSKAEKEARKKQKMQAFQAAKQKSKGTKNAKRWN* 705
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte17g01124 704 MobiDBLite consensus disorder prediction 659 704 - -
Pte17g01124 704 Pfam ABC transporter 125 300 IPR003439 GO:0005524
Pte17g01124 704 ProSitePatterns ABC transporters family signature. 556 570 IPR017871 GO:0005524|GO:0016887
Pte17g01124 704 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 110 368 IPR003439 GO:0005524
Pte17g01124 704 PANTHER ABC TRANSPORTER ATP-BINDING SUBUNIT 109 696 - -
Pte17g01124 704 Coils Coil 664 693 - -
Pte17g01124 704 CDD ABCF_EF-3 437 627 - -
Pte17g01124 704 FunFam ABC transporter ATP-binding protein 397 664 - -
Pte17g01124 704 FunFam Putative ABC transporter ATP-binding component 108 395 - -
Pte17g01124 704 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 111 344 IPR027417 -
Pte17g01124 704 Pfam ABC transporter 339 426 IPR032781 -
Pte17g01124 704 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 437 652 IPR003439 GO:0005524
Pte17g01124 704 Coils Coil 642 662 - -
Pte17g01124 704 Gene3D - 106 392 IPR027417 -
Pte17g01124 704 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 417 643 IPR027417 -
Pte17g01124 704 ProSitePatterns ABC transporters family signature. 272 286 IPR017871 GO:0005524|GO:0016887
Pte17g01124 704 SMART AAA_5 134 349 IPR003593 GO:0016887
Pte17g01124 704 SMART AAA_5 461 629 IPR003593 GO:0016887
Pte17g01124 704 CDD ABCF_EF-3 110 340 - -
Pte17g01124 704 MobiDBLite consensus disorder prediction 659 684 - -
Pte17g01124 704 Gene3D - 400 667 IPR027417 -
Pte17g01124 704 Pfam ABC transporter 453 584 IPR003439 GO:0005524
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte17g01124 Pte-Chr17 26260904 26265242 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte17g01124 434 654 Calmodulin-binding Proteins AT2G36910 24.390 1.87e-12 68.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte17g01124 - - mnt:21391702 1061.98