Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte17g01106 ATGAAGGAGAGGAAGTCCTATTTAGCTGTTATTCTGATACAAGTCGTATATACTGGCTCGTTCTTGATAAACAAAGCTGCATTCAACCACGGAATGAACAATTTCGTCTTCACCTTCTATAGGCAGGCCGCAGCTACAGTTTTCTTGGTTCCACTAGCTTTTTTCTTCGAGAGGAAAACAGCACCACGTTTATCATTTGAGATCTTCTGCAAAATCTTTCTTCTGTCTTTTTTCGGGATCACGTTGAGTTTGGACATATATGGTCTTGCACTTGAGTACACAACAGCAAGTTTGGCTTCTGCAACCACAAACTGCCTTCCTGTCATTACCTTCTTCTTGGCGCTTCTACTCGGAATGGAAGCATTGAAGCTGAGGTCGATTCCTGGGATGGCAAAGTTGTTAGGCGTTGTGTTATGCTTGGGAGGCGGATTAATCCTTGCCTTTTATAAAGGACATCGTTTTCAACTTTTGCGCAACCTTCACCTTCTGGGGAACCATGGCAGCCAAGAAGGTGAAGATCATATTCCTTCCGGAAAAACATGGATAAAGGGTTGCTTTTTCATGCTCCTCTCAAACATCTTTTGGGGCTTCTGGCTCGTGCTGCAGCAGGTGTATGTCATTAAAGACTACCCTTCAAAGCTTCTTCTTATGACTCTTCAGTGTTTGACAAGCTCAGTCCAGTCTTTTGCGGTAGCCATTGCCCTAGAAAGAAACATTGCGCAGTGGAAGTTGGGATGGGATGTTAGACTTCTTGCTGTTGCGTACAATGGCTTTGTGGTGACGGGTGTCACGTTCTATTGGCAATCATGGGTCGTAGAGAAAAGGGGACCTGTCTTCCTGGCCATGTCAACACCCTTAAGTCTAGCCATGACAACGGTCGCTTCAGCTCTTCTTTTGGGTGAGGTCATTCGATTGGGGAGTCTTTTAGGTGGGCTTTTGCTAGTTGGAGGGCTCTATGTCTTTCTATGGGGAAAGAGGAGAGAGCAGCTGCTGGAAGACTCGTTAAAGCTGACTCTGGCTACTGTGTGA 1029 0.4558 MKERKSYLAVILIQVVYTGSFLINKAAFNHGMNNFVFTFYRQAAATVFLVPLAFFFERKTAPRLSFEIFCKIFLLSFFGITLSLDIYGLALEYTTASLASATTNCLPVITFFLALLLGMEALKLRSIPGMAKLLGVVLCLGGGLILAFYKGHRFQLLRNLHLLGNHGSQEGEDHIPSGKTWIKGCFFMLLSNIFWGFWLVLQQVYVIKDYPSKLLLMTLQCLTSSVQSFAVAIALERNIAQWKLGWDVRLLAVAYNGFVVTGVTFYWQSWVVEKRGPVFLAMSTPLSLAMTTVASALLLGEVIRLGSLLGGLLLVGGLYVFLWGKRREQLLEDSLKLTLATV* 343
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte17g01106 342 PANTHER WAT1-RELATED PROTEIN 7 329 IPR030184 GO:0016020|GO:0022857
Pte17g01106 342 Pfam EamA-like transporter family 183 322 IPR000620 GO:0016020
Pte17g01106 342 Pfam EamA-like transporter family 6 131 IPR000620 GO:0016020
Pte17g01106 342 SUPERFAMILY Multidrug resistance efflux transporter EmrE 40 152 - -
Pte17g01106 342 SUPERFAMILY Multidrug resistance efflux transporter EmrE 239 327 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte17g01106 Pte-Chr17 26169074 26171502 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte17g01106 1 255 Nodulin-like Gene Family AT5G64700 60.078 9.49e-96 283
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte17g01106 - - vvi:100242046 416.001