Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte17g01104 ATGGCAAAAACTACAGAACAAGTGTACCCTGTTAAGGCTTTTGGTTGGGCTGCAAGAGATTCCTCAGGAATCCTTTCACCTTTTCATTTCTCTAGAAGGGAAAATGGTCCGGATGATGTCACGATAAAAATCCTTTACTGTGGAATTTGCCACTCAGATTTGCATGGGTTGAAGAATGAATGGGGTGTTACAGTTTACCCTATTGTTCCTGGGCATGAAATAGTTGGCGTTGTGACCAAAACTGGGAACAACGTGACAAAGTTCAAGGAGGCTGACAAAGTTGGGGTTGGTGTCATGGTTGATTCCTGCCGCAAATGCGAGACGTGCACAGAGGATCTAGAAAATTACTGCCCTCAGATGAAACTCACATACAATTCTCCTTATCATGATGGTACAATTACCTACGGTGGCTACTCTGATATCATAATTGTCGACCAGCACTTTGTTCTGCGTTTTCCTGACAACTTACCCCTTGCCGCTGGTGCTCCTCTTCTGTGTGCTGGGATTACGGTGTACAGTCCGATGAAATATTATGGAATGACAGATGCAGGAAAGCATTTGGGAGTTGTCGGACTCGGAGGTCTTGGTCATGTTGCCGTGAAATTTGGGAAAGCCTTTGGGTTGAAAGTCACTGTCATTAGCACCTCTCCAAAGAAGAAAGCTGAGGCCATTGAGAAGCTTGGGGCTGATTCCTTTCTTGTTTCTACTGACCCTTCACAAATTCAGGCAGCCCTGGGAACTATGGACTTCATTCTTGATACTGTGGCTGCAGTTCACCCCCTAGTACCTCTGCTTGGATTATTGAAGTTGAATGGCAAGTTGATCACAGTAGGTTTGCCTGACAAGCCCCTTCAGCTCGCCATATTTCCATTGATAATGGGACGCAAGCTTATTGGAGGAAGTCAGATTGGAGGGATGAAGGAGACACAGGAGATGCTAGACTTTTGTGCAAAGCACAGCATAACTTGTGACATTGAACTCATCCGCATGGATTATATCAACACAGCCATGGAAAGACTGGCCAAAGCTGATGTCAGATATCGCTTTGTGATTGATGTGGCAAATTCTTTGTCCCAGTAG 1080 0.4519 MAKTTEQVYPVKAFGWAARDSSGILSPFHFSRRENGPDDVTIKILYCGICHSDLHGLKNEWGVTVYPIVPGHEIVGVVTKTGNNVTKFKEADKVGVGVMVDSCRKCETCTEDLENYCPQMKLTYNSPYHDGTITYGGYSDIIIVDQHFVLRFPDNLPLAAGAPLLCAGITVYSPMKYYGMTDAGKHLGVVGLGGLGHVAVKFGKAFGLKVTVISTSPKKKAEAIEKLGADSFLVSTDPSQIQAALGTMDFILDTVAAVHPLVPLLGLLKLNGKLITVGLPDKPLQLAIFPLIMGRKLIGGSQIGGMKETQEMLDFCAKHSITCDIELIRMDYINTAMERLAKADVRYRFVIDVANSLSQ* 360
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte17g01104 359 FunFam Putative cinnamyl alcohol dehydrogenase 6 324 353 - -
Pte17g01104 359 Gene3D - 16 353 - -
Pte17g01104 359 CDD CAD1 14 352 IPR047109 GO:0016616
Pte17g01104 359 SMART PKS_ER_names_mod 23 351 IPR020843 GO:0016491
Pte17g01104 359 Pfam Alcohol dehydrogenase GroES-like domain 37 150 IPR013154 -
Pte17g01104 359 Pfam Zinc-binding dehydrogenase 194 317 IPR013149 -
Pte17g01104 359 SUPERFAMILY GroES-like 20 185 IPR011032 -
Pte17g01104 359 PANTHER ALDEHYDE REDUCTASE 7 356 IPR047109 GO:0016616
Pte17g01104 359 ProSitePatterns Zinc-containing alcohol dehydrogenases signature. 71 85 IPR002328 GO:0008270|GO:0016491
Pte17g01104 359 FunFam probable cinnamyl alcohol dehydrogenase 16 176 - -
Pte17g01104 359 Gene3D - 167 323 - -
Pte17g01104 359 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 156 321 IPR036291 -
Pte17g01104 359 FunFam Cinnamyl alcohol dehydrogenase 167 323 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte17g01104 Pte-Chr17 26145857 26148943 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte17g01104 12 357 Monolignol Biosynthesis Gene Families AT2G21730 70.690 0.0 511
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte17g01104 K00083 - mnt:21399565 555.444