Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte17g01092 ATGGATTCGAACCAGTATAGTCCAAAGTTCACAAATAGCTCTAGCTGCTGGAATATTGAGAAGATGGACATAAATCATGTGCATATGCTTCAAAACCAAATTGCCAGTAGCTTTGATCGCTCACTATGGCCAAACTATCCTATTCAAACGCATCAAATACCCTCCTCTTCCTCCTCTTCCTCCTCCAACCAAAATATGCCTTCTTCAAGTCTCCTTGGTGACATGTTAGCGCACTTTGAAGAGGATGAAGAACCTGAAGAAGAACTTGGTGCCATGAAGGAGATGATGTACAAGATCGCAGCTATGCAGCCTGTGGATATTGACCCCGCCACCATCCGCAAACCCAAGAGGAGAAATGTCCGAATCAGTGATGACCCCCAAAGTGTTGCTGCACGTCACAGGCGAGAGAGGATCAGTGAGAAAATTCGCATCCTCCAGAGACTTGTCCCCGGTGGAACAAAGATGGACACAGCTTCCATGCTTGATGAAGCTGTTCGCTATGTCAAGTTCTTGAAAAGACAGATTCGGCTGCTGCAATCAAATCAATTACACCCTCAGCCACAACAATCCAGCTTAGAAATTGCGATCAACGACAGCCATGTTACTACAGCTGCAGCTGGATGCTTAAGTACCGCTCCAGATCACTGGCCCTTTGCACCACATAGTAAACCAAACTGTGCTCCCACAAATTCTCCGTCAGTGCAGGAAACAATGGTCGCAGTTGGGCCCGGATATAGTATTGGAGGCCATGCTGCTAGTGGTGCCCTTCAGGGATTCAATCATGAGGTAATTAGTGACTGA 801 0.4682 MDSNQYSPKFTNSSSCWNIEKMDINHVHMLQNQIASSFDRSLWPNYPIQTHQIPSSSSSSSSNQNMPSSSLLGDMLAHFEEDEEPEEELGAMKEMMYKIAAMQPVDIDPATIRKPKRRNVRISDDPQSVAARHRRERISEKIRILQRLVPGGTKMDTASMLDEAVRYVKFLKRQIRLLQSNQLHPQPQQSSLEIAINDSHVTTAAAGCLSTAPDHWPFAPHSKPNCAPTNSPSVQETMVAVGPGYSIGGHAASGALQGFNHEVISD* 267
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte17g01092 266 FunFam BHLH transcription factor 125 189 - -
Pte17g01092 266 PANTHER TRANSCRIPTION FACTOR HEC3-RELATED 20 203 IPR045843 GO:0003700|GO:0006355
Pte17g01092 266 Pfam Helix-loop-helix DNA-binding domain 132 171 IPR011598 GO:0046983
Pte17g01092 266 Gene3D - 125 193 IPR036638 GO:0046983
Pte17g01092 266 SMART finulus 128 177 IPR011598 GO:0046983
Pte17g01092 266 CDD bHLH_AtIND_like 123 185 - -
Pte17g01092 266 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 128 188 IPR036638 GO:0046983
Pte17g01092 266 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 122 171 IPR011598 GO:0046983
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte17g01092 Pte-Chr17 25966215 25967015 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte17g01092 89 201 Basic Helix-Loop-Helix Transcription Factor Gene Family AT5G09750 80.702 1.88e-48 158
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Pte17g01092 HLH 1.1e-06 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte17g01092 - - gmx:100775296 252.292