Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte17g01091 ATGCTTCAAATGGCCACCGTCATCCTCTTTTCTATCACCTCACTTCTCCTCTTCTTCTCTCTCTCGTCTGCTTCACGCAATCCCCCTTCAGACAACCCCACAGTCAACTCAGTCCCATTACAAATCCAACAAGCTTGCAAGGCCACCCGTTTCCCTGATCAATGCCAATCCTCCCTGACCCAGTCCGCCAGCAACGTCCCTCCCAACCCAGACCCGATTCAAATTATCCAAAGTGCTATTCGGGTATCCTCAGACAACCTTGCTACCGCCCAATCCATGGTCAAGTCCATTCTGGACTCTTCCGCGGGAAATCTGAATCGCACGACCGCTGCCAAGAACTGCATGGAGGTGCTGCATAATTCCGAGTACCGTATCTCCATCGCCAAGGACGCGGTGACACGTGGAAAGAATAAGGATGCTCGTGCTTGGATGAGTGCCGCGTTGCTTTATCAGTATGACTGCTGGTCAGCCCTCAAGTACGCCAACGACACTCAAATGGTGGGTAAAACGATGGCGTTTTTGGACGCTTTAACTAGTCTCTCCAGCAACGCGCTGAGCATGTTAGTGTCGTTCGATAACTTCGGAAACGATAGCGCTTCATGGAAACCTCCCATGACAGAGCGAGATGGGTTCTGGGAAGCATCCAGATCGGGTGGTGGATCCGGGAATGGAACCAGGGCCGAATTCCCGCCTGCGGAGAAGGCTGACGTTACTGTCTGCAAGGACGGAAGCAATGGATGTTACAAGACCGTACAGGAAGCAGTTACAGCGGCACCGGATAACGCAGGCACCAAAAAGTTTGTGATCCACATTAAAGAAGGGGTCTATGATGAGATCGTTAGGATTCCGTTGGAAAAGAAGAACGTGATATTCTTGGGCGATGGCATGGGCAAAACGGTCATTACAGGTTCCTTGAATGCGGGCCAACCGGGAATTTCTACGTACAACACAGCAACAGTTGGAGTTCTTGGTGATGGGTTCATGGCAAGTGGTCTAACCATTCAAAACACGGCAGGCCCAGATGCTCACCAAGCAGTGGCTTTAAGATCAGACAGTGATCTGTCTTTCATTGAGAACTGTGAATTTCTAGGCAATCAAGACACACTCTATGCTCACTCCTTGCGCCAATTCTACAAGTCCTGCCGCATCATAGGAAATGTGGACTTCATATTTGGAAATTCGGCTTCGGTTTTCCAGGACTGTGAAATCTTGGTCCGTCCCCGACAAATCAATCCAGAACAAGGTGAGAATAATGCTGTTACCGCACATGGCAGGACAGATCCAGCTCAATCAACAGGCTTTGTTTTCCAGAAATGTTTGATAAATGGCACCGAGGAGTACATGGCACTATACCGTAGCAAACCCGATGTGCATAAAAATTACTTGGGAAGGCCATGGAAAGATTACTCACGGACAGTTTTCATTCAATGTAATTTGGAAGCTCTTGTTACACCGCAAGGATGGATGCCGTGGACTGGTGATTTGGGATTGAAAACACTGTATTATGGTGAGTTCGAAAATTCGGGACCTGGGTCTAATCTGTCTCAGAGAGTAAACTGGAGCAGCAGTATCCCAGCTGAGCATATTTCGACCTATTCAATAGAGAATTTTATTCAAGGAGATGAATGGATCAAATTACCTTAA 1644 0.4824 MLQMATVILFSITSLLLFFSLSSASRNPPSDNPTVNSVPLQIQQACKATRFPDQCQSSLTQSASNVPPNPDPIQIIQSAIRVSSDNLATAQSMVKSILDSSAGNLNRTTAAKNCMEVLHNSEYRISIAKDAVTRGKNKDARAWMSAALLYQYDCWSALKYANDTQMVGKTMAFLDALTSLSSNALSMLVSFDNFGNDSASWKPPMTERDGFWEASRSGGGSGNGTRAEFPPAEKADVTVCKDGSNGCYKTVQEAVTAAPDNAGTKKFVIHIKEGVYDEIVRIPLEKKNVIFLGDGMGKTVITGSLNAGQPGISTYNTATVGVLGDGFMASGLTIQNTAGPDAHQAVALRSDSDLSFIENCEFLGNQDTLYAHSLRQFYKSCRIIGNVDFIFGNSASVFQDCEILVRPRQINPEQGENNAVTAHGRTDPAQSTGFVFQKCLINGTEEYMALYRSKPDVHKNYLGRPWKDYSRTVFIQCNLEALVTPQGWMPWTGDLGLKTLYYGEFENSGPGSNLSQRVNWSSSIPAEHISTYSIENFIQGDEWIKLP* 548
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte17g01091 547 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 42 187 IPR035513 -
Pte17g01091 547 PANTHER PECTINESTERASE 16 545 - -
Pte17g01091 547 Pfam Pectinesterase 236 541 IPR000070 GO:0030599|GO:0042545
Pte17g01091 547 Gene3D - 232 546 IPR012334 -
Pte17g01091 547 Pfam Plant invertase/pectin methylesterase inhibitor 42 187 IPR006501 GO:0004857
Pte17g01091 547 CDD PMEI-like_3 45 187 - -
Pte17g01091 547 FunFam Probable pectinesterase/pectinesterase inhibitor 51 40 190 - -
Pte17g01091 547 FunFam Pectinesterase 231 546 - -
Pte17g01091 547 NCBIfam pectinesterase inhibitor domain 11 187 IPR006501 GO:0004857
Pte17g01091 547 SUPERFAMILY Pectin lyase-like 232 545 IPR011050 -
Pte17g01091 547 Gene3D Invertase/pectin methylesterase inhibitor family protein 40 191 IPR035513 -
Pte17g01091 547 ProSitePatterns Pectinesterase signature 1. 263 282 IPR018040 -
Pte17g01091 547 SMART PMEI_2 37 187 IPR006501 GO:0004857
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte17g01091 Pte-Chr17 25950381 25953989 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte17g01091 32 546 Carbohydrate Esterase AT5G09760 69.826 0.0 756
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte17g01091 - - qsa:O6P43_023358 853.973