Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte17g01068 ATGGCCGCGGAGTTAGACTTGCCGCCTGGTTTCAGATTTCACCCCACAGACGACGAGTTGGTCAATCATTATTTGTGTAGAAAATGTGCCTCGCAACCTTTAGCTGTTCCTATAATCAGAGAGATCGATTTGTATAAGTACGATCCATGGCAACTACCAGAATTGGCTCTGTGTGGTGAGAAGGAATGGTACTTCTTTTCTCCAAGGGATAGAAAATATCCAAACGGATCAAGACCGAACCGGGCAGCTGGAGCCGGGTACTGGAAGGCAACTGGTGCAGACAAACCAATAGGCAAGCCAAAGCCACTTGGAATAAAAAAGGCACTTGTATTCTATGCCGGAAAAGCCCCTAGAGGAATCAAGACCAACTGGATCATGCATGAATATCGCCTTGCGAATGTGGATAGGTCTTCTGGAAAGAAAAAAAATTTGAGGCTTGATGATTGGGTACTGTGTCGAATTTACAATAAGAAAGGTAGCCTAGAGAAATATGACACCATGCACCACAAAATGGAAGAGTCGACTGAAATTGAAGAGACGAAATCAGATATCATGATGTTTGGTCAGAACATGAACATGTTACCGGTACAATCGTCAAAACAACAGCCAATGTTGATGAATTTCCATTTGCACATGGACATGTCAGATTCAGTACCAAAGTTACACACTGATACGAGCAGCTCCGAGTTCGTGCACTCACCTGATATCACGTACGAGAAGGAGGTCCAGAGTGAACCAAAATGGAAAGAGCTAGAGGATGCTCTTGATTTACAGTTCAATTACCTGGGCAACGATTTATTGGATGACCCTTTTGCCCCTCCGGCTCATTACGATGCGAGCCAGCTCTCGCCATTACAGGATATGTTTATGTATCTACAGAAGCCTTTTTGA 891 0.4411 MAAELDLPPGFRFHPTDDELVNHYLCRKCASQPLAVPIIREIDLYKYDPWQLPELALCGEKEWYFFSPRDRKYPNGSRPNRAAGAGYWKATGADKPIGKPKPLGIKKALVFYAGKAPRGIKTNWIMHEYRLANVDRSSGKKKNLRLDDWVLCRIYNKKGSLEKYDTMHHKMEESTEIEETKSDIMMFGQNMNMLPVQSSKQQPMLMNFHLHMDMSDSVPKLHTDTSSSEFVHSPDITYEKEVQSEPKWKELEDALDLQFNYLGNDLLDDPFAPPAHYDASQLSPLQDMFMYLQKPF* 297
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte17g01068 296 ProSiteProfiles NAC domain profile. 7 157 IPR003441 GO:0003677|GO:0006355
Pte17g01068 296 Pfam No apical meristem (NAM) protein 8 131 IPR003441 GO:0003677|GO:0006355
Pte17g01068 296 PANTHER NAC TRANSCRIPTION FACTOR 56 7 202 - -
Pte17g01068 296 SUPERFAMILY NAC domain 3 157 IPR036093 GO:0003677|GO:0006355
Pte17g01068 296 Gene3D NAC domain 16 161 IPR036093 GO:0003677|GO:0006355
Pte17g01068 296 FunFam NAC transcription factor 16 161 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte17g01068 Pte-Chr17 25720420 25722196 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte17g01068 1 297 NAC Transcription Factor Family AT1G01720 63.399 7.07e-124 354
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Pte17g01068 NAM 6.3e-38 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte17g01068 - - qlo:115973450 446.047