LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Pte17g01063	ATGTCAGAAATGCCTAGGAGTGCTGCATTCCTGACACAGGCAATTGAGAACGACGATTTCCAGCGTGAAAACTTCCACAAATTCTTCCAGTGCTGGCTAGTTGAACAAAGCGAACATCTTGAGGATCTCAAAGCTGCCTGTGAAAAATACCAGGCAAGAACATTCGCCACCCCTTATGCTGAAGATGGACCAACTCCTGAGCCTGTAGATGAGCCAGTCTTGCGATCGATCATCAAGACAATGATTGAGCATTACGAGCAATACTACAGAACCAAGTCAGCATGGGCCAAGCATGATGCTTTAGGAATGTTTTCTCCAGCATGGAGGAGCTCATTGGAGGGTGCTTTTTCCTGGATGGGTGGATGGCATCCTAGTGTGGCAATCCATTTGATTTACACCAAGTCTAGATTGCAACTCGAGGGCCAGCAGAATCAGTTGGTTCGGGGGCTGACTCCATGTGACTTGGGGGATCTCTCTGCAAACCAACTTTCCCAAGTTGACGATTTGCACAAACGCACCGTGAGACAAGAGGGACAAATTATAGAGATGATGGCAGCCCTGCAGGAGACAGTGGCAGACTCATCCATGGTGGAGTTATCACATGCTGTTACTGAGATGTTAAGAGGGGCTAGTGGTGAATCCGGAGAAGGCCCCAGGTCGAACATTGAGGCCAGGATAGAAGAAATACTGACATCAAAGGAGGATGTTCTGGAGGAGATGCTGCAGACAGCTGATGACTTGAGGCTCAGGACATTAAAGGCAATTGTGGATATTCTGACTCCAATTCAGGCTGTTCAGTTTTTGATGGTTGCGGCAGAGCTTCATCTTCAGTTTCATGATTGGGGGAAAAACAGAGATGCCAGGCACGAACAACACAATGAATCAAGTCATCTTGCTCAATAG	903	0.4751	MSEMPRSAAFLTQAIENDDFQRENFHKFFQCWLVEQSEHLEDLKAACEKYQARTFATPYAEDGPTPEPVDEPVLRSIIKTMIEHYEQYYRTKSAWAKHDALGMFSPAWRSSLEGAFSWMGGWHPSVAIHLIYTKSRLQLEGQQNQLVRGLTPCDLGDLSANQLSQVDDLHKRTVRQEGQIIEMMAALQETVADSSMVELSHAVTEMLRGASGESGEGPRSNIEARIEEILTSKEDVLEEMLQTADDLRLRTLKAIVDILTPIQAVQFLMVAAELHLQFHDWGKNRDARHEQHNESSHLAQ*	301

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Pte17g01063	300	Pfam	Seed dormancy control	70	133	IPR025422	GO:0006351\|GO:0043565
	Pte17g01063	300	Coils	Coil	33	53	-	-
	Pte17g01063	300	ProSiteProfiles	DOG1 domain profile.	22	288	IPR025422	GO:0006351\|GO:0043565
	Pte17g01063	300	PANTHER	DOG1 DOMAIN-CONTAINING PROTEIN	23	295	-	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Pte17g01063	Pte-Chr17	25706923	25708424	Wgd

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Pte17g01063	69	273	Calmodulin-binding Proteins	AT5G65210	28.846	2.58e-13	67.8

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Pte17g01063	-		-	rvl:131303584	309.686