Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte17g01059 ATGCCTCTGTTAAAGAAAACGCCTTTCCCACTGGATGAACCACCTGAGGATCTGGAACCTAACGAGCTTGTTTTTCAAGTCCGTTTTACTAAAGAGATATATCGCGATTATCATGATTATCTGAATCGAATCAACTTCTATCGTCAGAGGGTCTGGACGTGTAAAGTCACCGGGAAAACTAATCTGACTTATGAAGAGGCTTTAGTGTCAGAAAAACTTGCCACTGAAAAAGTACTGCAATTTCCCAAAGACCTAGTGGCACCTGCTCTACGCATTATCCAATACAGCATGCTTTCACTAAAAGATCTTGCTGATGCAATGGCTGAGATACTGCAGAACCAGTTGTTCGTTGGTACTGAATTATGTGCAATGAAAGATGGCAAAGAAGTCCCATGCAAAATACTAGAAGTTATAAGAGGTGTTAACAAGGTTCACTATGAAGTAGGCTGGCTTGATGAGAAGAAGAAAATAATGGCAAAATCAGAGGTCAGTAGAGCAGCTTTGATACAGAAGAAGCTACGGTTAAGTAGAAATATATTGAAGTCTTTCATCCGCCAATCAACGTACCGGAATGCACCTTGGGTTATAAATAATGAGCTTGCTCGGAGTCATGGAATCTCAACTGATATTCCAGAAGTATTGAGGGGCACTGTTTTCTTCAAGAATGGTCTCATCTGTAACAAGAAAAGAAAATACGAGGAAGTTAAAGATGAAGATGGAAATCACTTCCGAAAGAAGTCCGAAAAGGGGGAAGGTAAAATTGGGGAAGAAAATTGCCACAGTGAGGAAGAACCAACTAAATATCCAATTGATGACCTTTTGCTGAAACCTGGTCCTTATGATTCAGTTCTTGCTGAACGACCATCTCCATGTAGGGACTTTAGCGTTCCGATGGATTGTGTTGGGGATCTTCTGATGGTTTGGGACTTCTGTTCTTCATTCTGCAAGTTGTTGCACTTGTGGCCTTTTTCTCTTGAAGATTTTGAAAACGCTATATGCCACAAGGATGGCAATGTGGTTCTTCTAGTTGAATGTCATGCTGCAATTCTTCGGCTGCTTATAGAAGACAATGGACAATACTTTTTATGTGTTCAGAAAAGACGGCAGAAGTTAAAGATTACAATGAGCAATTGGACAGACTATTTGTGTGATTTTCTGGAAATGATCAAGCTTCCTGAATTATGTCACTATGAATCAACTATAAAGCGGGGGCACTATTCCCTTGTAGATACTCAGGGTAAACTAGGAATTCTCCAGGAACTGGTCAATCAAGCCCTTGAAACAGCAATTATCAGGGAAAAATTGGATGAGTTTATTCAACAGCGACAGGAGCTTGGAGCCTCAAAACGAGGAGAAGCATTAGAAGATGGTAAAAAGAGAAGACAAGAAAAAGAACATTTAAAGGCTGACTCAGATAGCAATAATAACTGCAAACAGAAGGTTGGCACAACTAATGGAAACGGGGGAACGGATACTGCAAGAGAAGGATCTTTAACAGAAGAAAGTGGTAGAAATAATTCAAATGCCATGCCCAAAAGAAAGCCAAAAAAGTGCGGGGATGTGAAACTGCTGTCTGAGAATGGTAATGAATCATCTCGGAAGGAATCACAACATCATGCAGAGAGTGATCAGGGAACTGTGGGAAAGAGCAATGTAGAAGAAAGGAGAGAATATTATGAACGGGAAATGGAGAAACGATTTATCCGCGCCAATCCCTTGGGCAAAGATAGACACTATAACAGGTATTGGTGGTTCCGGCGTGATGGGAGGATATTTGTTGAGAGTTCTGACTCGAAGGAATGGGGATACTACATGAGCATGGAAGAGCTTGATCAATTGATGGCTTCACTAAACTGTAAAGGTGTTCGAGAAAGAGAACTATGGAGACAACTGAAAAGATATTATAACAGGATGCGCTTGGAGCTTCAGAAGAGATCAAAGGACTTGACACATCAACTTGCAATGGATGAGGGTATTCTGCGAAGATCTACTCGTGTACGAGCCCCGCCGAGGGAAAATCCTGCCAATGCTTTCCTCAGGTATGTTAACAAATGGAAGGAAGATTAG 2067 0.4117 MPLLKKTPFPLDEPPEDLEPNELVFQVRFTKEIYRDYHDYLNRINFYRQRVWTCKVTGKTNLTYEEALVSEKLATEKVLQFPKDLVAPALRIIQYSMLSLKDLADAMAEILQNQLFVGTELCAMKDGKEVPCKILEVIRGVNKVHYEVGWLDEKKKIMAKSEVSRAALIQKKLRLSRNILKSFIRQSTYRNAPWVINNELARSHGISTDIPEVLRGTVFFKNGLICNKKRKYEEVKDEDGNHFRKKSEKGEGKIGEENCHSEEEPTKYPIDDLLLKPGPYDSVLAERPSPCRDFSVPMDCVGDLLMVWDFCSSFCKLLHLWPFSLEDFENAICHKDGNVVLLVECHAAILRLLIEDNGQYFLCVQKRRQKLKITMSNWTDYLCDFLEMIKLPELCHYESTIKRGHYSLVDTQGKLGILQELVNQALETAIIREKLDEFIQQRQELGASKRGEALEDGKKRRQEKEHLKADSDSNNNCKQKVGTTNGNGGTDTAREGSLTEESGRNNSNAMPKRKPKKCGDVKLLSENGNESSRKESQHHAESDQGTVGKSNVEERREYYEREMEKRFIRANPLGKDRHYNRYWWFRRDGRIFVESSDSKEWGYYMSMEELDQLMASLNCKGVRERELWRQLKRYYNRMRLELQKRSKDLTHQLAMDEGILRRSTRVRAPPRENPANAFLRYVNKWKED* 689
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte17g01059 688 ProSiteProfiles DDT domain profile. 298 359 IPR018501 -
Pte17g01059 688 PANTHER BROMODOMAIN ADJACENT TO ZINC FINGER DOMAIN, 2A 1 686 - -
Pte17g01059 688 MobiDBLite consensus disorder prediction 450 473 - -
Pte17g01059 688 SMART testlast3 298 359 IPR018501 -
Pte17g01059 688 ProSiteProfiles WAC domain profile. 22 128 IPR013136 -
Pte17g01059 688 MobiDBLite consensus disorder prediction 513 552 - -
Pte17g01059 688 MobiDBLite consensus disorder prediction 450 552 - -
Pte17g01059 688 Pfam Williams-Beuren syndrome DDT (WSD), D-TOX E motif 568 634 IPR028941 -
Pte17g01059 688 Pfam DDT domain 299 356 IPR018501 -
Pte17g01059 688 Pfam ATP-utilising chromatin assembly and remodelling N-terminal 24 120 IPR013136 -
Pte17g01059 688 MobiDBLite consensus disorder prediction 242 264 - -
Pte17g01059 688 MobiDBLite consensus disorder prediction 474 509 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte17g01059 369 627 Homeobox Transcription Factor Family AT5G44180 27.941 5.14e-10 61.2
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR DDT Pte17g01059 WAC_Acf1_DNA_bd 1.3e-27 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte17g01059 - - qsa:O6P43_023448 876.7