Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte17g01058 ATGCAGCTGGAGGGGAGCTTTTTGAGCGGATTTGTAGTGCCGGGAGATTCAGCGAAGATGAGGCAAGTCATCAGTTTCTCTATATCTGCACTGCTTTACTTAAGTGCCTGCACAAAATGGTACGGTTTCAGTAATTCACTGTTTGTCAATGACTTTGTCATCCAGGCAAGATACTTTTTCCAGCAGTTGATCTCTGGCGTCAATTATTGTCATTCCATGCAAATTTGTCATAGAGACTTGAAGCTCGAAAACACACTTTTAGACGGGAGCCCTGCACCACGATTAAAAATTTGTGACTTCGGTTATTCGAAGTCATCTTTGCTCCATTCAAGACCCAAATCAACAGTTGGAACTCCAGCATATATAGCCCCTGAAGTTCTCTCTAGGCGTGAATATGATGGGAAGTTGGCTGATGTATGGTCTTGTGGGGTGACTCTCTATGTTATGCTGGTTGGAGCCTACCCATTTGAGGACCAAGATGACCCTAAGAACTTTAGGAAAACAATTCAGCGGATAATGGCTGTCCAGTACAAGATTCCAGACTATGTACACATATCTCAAGATTGCAGAAACTTGCTCTCTCGCATATTTGTTGCCAGTCCGATGAGGAGAATTACGATTAAAGACATTAAAAGCCATCCATGGTTTTTGAAGAATTTACCTAGGGAGCTTACTGAGACTGCTCAAGGCACTTATTACCAGAGAGACAACCCCAGCTTTTCCGTGCAAAGTGTGGAGGAAATAATGAAAATTGTTGGGGAGGCAAGGAGCCCACCCCCTGTTTCCAGGCCGGTAAGAGGTTTTGGCTGGGGTGCTGAAGAAGATGATGAAGAAGTGAAAGAAGACGAGTTGGAGGACGAGGATGAGGAGGATGAGTATGACAAGAGGGTCAAGGAGGTTCATGCAAGTGGAGAATTTCATATCAGTTAA 930 0.4419 MQLEGSFLSGFVVPGDSAKMRQVISFSISALLYLSACTKWYGFSNSLFVNDFVIQARYFFQQLISGVNYCHSMQICHRDLKLENTLLDGSPAPRLKICDFGYSKSSLLHSRPKSTVGTPAYIAPEVLSRREYDGKLADVWSCGVTLYVMLVGAYPFEDQDDPKNFRKTIQRIMAVQYKIPDYVHISQDCRNLLSRIFVASPMRRITIKDIKSHPWFLKNLPRELTETAQGTYYQRDNPSFSVQSVEEIMKIVGEARSPPPVSRPVRGFGWGAEEDDEEVKEDELEDEDEEDEYDKRVKEVHASGEFHIS* 310
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte17g01058 309 SUPERFAMILY Protein kinase-like (PK-like) 55 259 IPR011009 -
Pte17g01058 309 ProSiteProfiles Protein kinase domain profile. 1 216 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pte17g01058 309 MobiDBLite consensus disorder prediction 274 293 - -
Pte17g01058 309 PANTHER SERINE/THREONINE KINASE 55 254 - -
Pte17g01058 309 SMART serkin_6 6 216 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pte17g01058 309 Gene3D Transferase(Phosphotransferase) domain 1 53 224 - -
Pte17g01058 309 FunFam Serine/threonine-protein kinase SRK2A 44 224 - -
Pte17g01058 309 ProSitePatterns Serine/Threonine protein kinases active-site signature. 75 87 IPR008271 GO:0004672|GO:0006468
Pte17g01058 309 Pfam Protein kinase domain 55 216 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pte17g01058 309 MobiDBLite consensus disorder prediction 259 309 - -
Pte17g01058 309 MobiDBLite consensus disorder prediction 294 309 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte17g01058 Pte-Chr17 25670294 25673600 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte17g01058 56 220 CBL-interacting serine-threonine protein kinases AT5G10930 45.930 1.95e-41 147
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_OST1L Pte17g01058 Pkinase 1.2e-44 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte17g01058 K14498 - qsa:O6P43_030279 441.81