Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte17g01045 ATGGCAACATTAGAAGTATCGACAAAGGGTGATGGTGTAAGCGGTAAAGGGGATAGTTACACTTCTGAATATAGCGACCATAACAATGCTGGGAATTGTACAGCTAAGCTGAAAGGACAACCTTCATCTTGTTCTGATGCGGAAACTGCGCTTTACAAGGAGCTATGGCATGCCTGTGCGGGTCCTCTTGTCACTGTACCCCGCAAAGGAGAGCTGGTCTTCTACTTCCCTCAAGGACACATAGAGCAGGTGGAAGCATCGACGAATCAAGTGGCAGACCAGCAGATGCCTGTCTATAGTCTCCCACCCAAAATCCTCTGTCGTGTCATCAATGTAGAATTGAAGGCTGAACCAGATACAGATGAAGTTTTTGCCCAGATCATTTTACTTCCAGTGGAAAATCAAGATGAAAGTACTATGAAGAAAGAAGATCCCCTTCCTCCACCACCCCGCTTCCAAGTTCATTCATTTTGCAAGACACTTACGGCTTCAGATACAAGCACTCACGGTGGATTCTCTGTTTTAAGAAGGCATGCAGATGAATGTCTTCCTCCATTGGACATGTCAAGGCAACCTCCTACCCAGGAACTGGTTGCCAAAGATCTACATGGAAATGAGTGGCGATTTAGGCATATTTTTAGGGGTCAACCACGCAGACATTTACTGCAAAGTGGATGGAGTGTTTTTGTTAGCTCAAAGAGACTGGTAGCAGGAGATGCTTTTATATTTCTCAGAGGTGAAAATGGGGAGCTTCGTGTTGGTGTAAGGCGTGCAATGCGACAACAGAGTAATGTTTCATCTTCTGTTATTTCCAGTCACAGCATGCACCTTGGTGTTCTTGCCACTGCTTGGCATGCAGTTCTGACCAAAACCTTTTTCACAGTCTACTATAAGCCGAGGACTAGCCCATCTGAGTTCATTGTCCCATTTGATCAGTATATGGATTCTCTTAAGAACAACTACAGCATAGGGATGAGGTTCAAAATGAGATTTGAAGGTGAAGAAGCTCCAGAACAGAGATTTACGGGTACAATTGTTGGGATAGAAGATGCTGACACAAGAAGGTGGCCGGATTCCAAATGGAGAAGCCTCAAGGTAAGATGGGATGAAACATCTGCCGTACCTCGACCTGAAAGGGTCTCTCCTTGGAAAATAGAACCTGCACTTGCCCCCCCAACCATTAATCCCCTCCCAATGCCCAGGCCTAAAAGGCCCCGAGCTAATGTTGTCCCTTCATCTCCTGACTCCTCTGTTCTTACAAGGGAAGGTTCGTCTAAAATAGCATTAGACACTTCAGCAGCCATGGGGTTTTCAAGGGTCTTGCAAGGTCAAGAGTTCACGACCTTGAGAGGCAAGTTTGTTGAAAACAATGAGTCCGACACTGTGGAGAAGTCTGTTGTCTGGCCGCCTGTATTGGATGATGAGAAGATTGATGTAGTTTCTGCATCAAAAAGATATGGTTCAGAGTACTTGATGTCCACGGGGAGACACGAACCGATGTACTCAGATCTGTTGTCAGGATTTGGTTCCAAGGCTGACATGTCCCACAGCATTAGTCCCTCTTTGGGTGATCAATCGGCTACTCCAGTAATAAAACATGCAATTGAGGATGGGAGGTTTGCTAATTCATGGTCTTTAATGCCATCTAATCTGTCGCTAAATTTGGACTCTAACCTGAAAAGTTCAGTACAAGTTGGTGATATGCATTGCGAAGCTCGCGGAAATATTAGGTTTAATGCATTTGGTGAGTATCCTGTGTTTCATGGACGTATAGTTGACCATTCAAATGGAAATTGGTTGATACCTCCCCCACCTTCTACTCTGTATGCAACCTCCATGGAAGAATTGGCTACTAAACCTTTGCCAGCAAGTATATGTGAAACTCTCAAGCCAAAAGATGGAAACTGTAAGCTCTTTGGCATACCCCTCATCAGTAACCCTGTTATGCCACTGAATATTCCATCACAAAGAAATGTTGTTAATGAGCCAACTTGTCATGTGCAAAGCATATCGCATGAGTCTGATAAAAAAATAGAACAGTTGAGGGGCTCTCATGCGGTTGATATTTTGGTTGATGAGCCTGAGAAATCGTTACATAGTTGTCAGCAAAATGCAAAAGATAGTCAGGGTAAGCCAAGTGGTGGCTCTGGAAGGAGTTGCACAAAGGTTCACAAAAAGGGGATTGCACTTGGTAGGTCCGTGGACCTTACAAAGTTCAACAATTATGATGAACTGATTGCAGAATTAGACCAGTTGTTTGATTTTGGCGGCGAATTGATGGCTCCTGAAAAGGATTGGCTTGTTGTCTATACGGACAACGAGGGGGATATGATGCTTGTTGGAGATGATCCCTGGCAGGAATTCTGTGCCATGGTTCGCAAGATTTTCATCTATCCCAAAGAAGAGATTCAGACTATGAGCCCAGGGGCACTGAACTCCAAGGGTGAAGAGAATTCTGAAGCTACTGATGCAAAAGAAATAAAAAGCCAGCCTCTTCATCCTGTTCACACTCCCGAGGCTTACTAG 2526 0.4462 MATLEVSTKGDGVSGKGDSYTSEYSDHNNAGNCTAKLKGQPSSCSDAETALYKELWHACAGPLVTVPRKGELVFYFPQGHIEQVEASTNQVADQQMPVYSLPPKILCRVINVELKAEPDTDEVFAQIILLPVENQDESTMKKEDPLPPPPRFQVHSFCKTLTASDTSTHGGFSVLRRHADECLPPLDMSRQPPTQELVAKDLHGNEWRFRHIFRGQPRRHLLQSGWSVFVSSKRLVAGDAFIFLRGENGELRVGVRRAMRQQSNVSSSVISSHSMHLGVLATAWHAVLTKTFFTVYYKPRTSPSEFIVPFDQYMDSLKNNYSIGMRFKMRFEGEEAPEQRFTGTIVGIEDADTRRWPDSKWRSLKVRWDETSAVPRPERVSPWKIEPALAPPTINPLPMPRPKRPRANVVPSSPDSSVLTREGSSKIALDTSAAMGFSRVLQGQEFTTLRGKFVENNESDTVEKSVVWPPVLDDEKIDVVSASKRYGSEYLMSTGRHEPMYSDLLSGFGSKADMSHSISPSLGDQSATPVIKHAIEDGRFANSWSLMPSNLSLNLDSNLKSSVQVGDMHCEARGNIRFNAFGEYPVFHGRIVDHSNGNWLIPPPPSTLYATSMEELATKPLPASICETLKPKDGNCKLFGIPLISNPVMPLNIPSQRNVVNEPTCHVQSISHESDKKIEQLRGSHAVDILVDEPEKSLHSCQQNAKDSQGKPSGGSGRSCTKVHKKGIALGRSVDLTKFNNYDELIAELDQLFDFGGELMAPEKDWLVVYTDNEGDMMLVGDDPWQEFCAMVRKIFIYPKEEIQTMSPGALNSKGEENSEATDAKEIKSQPLHPVHTPEAY* 842
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte17g01045 841 MobiDBLite consensus disorder prediction 698 720 - -
Pte17g01045 841 CDD B3_DNA 155 257 IPR003340 GO:0003677
Pte17g01045 841 ProSiteProfiles B3 DNA-binding domain profile. 157 259 IPR003340 GO:0003677
Pte17g01045 841 FunFam Auxin response factor 155 259 - -
Pte17g01045 841 SUPERFAMILY CAD & PB1 domains 716 795 - -
Pte17g01045 841 FunFam Auxin response factor 320 392 - -
Pte17g01045 841 Gene3D - 715 807 - -
Pte17g01045 841 MobiDBLite consensus disorder prediction 807 841 - -
Pte17g01045 841 Pfam AUX/IAA family 763 806 IPR033389 -
Pte17g01045 841 MobiDBLite consensus disorder prediction 818 832 - -
Pte17g01045 841 Gene3D - 154 259 IPR015300 -
Pte17g01045 841 MobiDBLite consensus disorder prediction 394 423 - -
Pte17g01045 841 MobiDBLite consensus disorder prediction 698 716 - -
Pte17g01045 841 Pfam Auxin response factor 283 365 IPR010525 GO:0003677|GO:0005634|GO:0006355|GO:0009725
Pte17g01045 841 Gene3D - 320 390 - -
Pte17g01045 841 SMART B3_2 157 259 IPR003340 GO:0003677
Pte17g01045 841 Pfam B3 DNA binding domain 157 258 IPR003340 GO:0003677
Pte17g01045 841 FunFam Auxin response factor 714 807 - -
Pte17g01045 841 SUPERFAMILY DNA-binding pseudobarrel domain 153 286 IPR015300 -
Pte17g01045 841 ProSiteProfiles PB1 domain profile. 718 802 IPR000270 GO:0005515
Pte17g01045 841 MobiDBLite consensus disorder prediction 1 23 - -
Pte17g01045 841 PANTHER AUXIN RESPONSE FACTOR 4-RELATED 49 807 IPR044835 GO:0003677|GO:0006355|GO:0009725
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte17g01045 Pte-Chr17 25553762 25558535 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte17g01045 1 829 B3 DNA Binding Superfamily AT5G62000 63.287 0.0 1066
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF B3-ARF Pte17g01045 B3 3.3e-21 CL0405
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte17g01045 - - qsa:O6P43_023511 1218.76