Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte17g01042 ATGAGTCCACAAATAGCGCAGGCTTTTCGAGAGAAAAAGGAAGCTGAAGAAAAAATTATTGCCAAGGATTATGTGGGTGCCAGGGATAAGTTGCTTAGAGCACAGTATCTTTTCCCAGGAATTCAGAATATTGTGCCTATGATTACTGTCACTAACATTTTAGCTGCAGGCAACATTGAGTTTCCTGAAAGTGGGATTGATTACTACTGGGTTATTCAACTGACACCTAATTGCTCCTCATCTGCTGTACGGTCCCGGTACGAGAAGCTCACTGCATTGCTCAAACCCATCAGAAGCAGATTTCCTGGGACTGATTTTGCCCTCAAACTTGTTCATGATGCGTTTTCTGTGCTCTCTGATTACAAAAAGCGTTCTGAGTATGACATCAAAAGAGATTCCAGTTGGGAACAATATAAATCCTTCAGCATTCAGCTTCCACCATTGCCAAGTCAGATTGATTCATGTGGTGAAACGGTTACTAGTGCTCAAAGTTCTTCAGTAGATAGGGTCTCAAGACTCTCTACAAGTTGTACCATGGAGAAAAGCAATGAAAGGGCCGAGGTAATTTTGCAGGATGATTGCAGACGTGATGATATTGATATAGATCAAAAGCCTGCCTTGCAAAAACGCAGTCATCTTCGCACCTATATGAGTAGTACAACTGGTAGGAAGAGAGGAGGGATGGCTTTGTCTTCAGGAAGTGTAAGCTCGCCTACAGTGCAACATGCTAAATCAGGAGAGAAAAAATGTGCATCCTTAGGGAATACAGCAGAGAGAAGGCCTTGTCAGCACTTCTTTGATTTTGAAAGTTTAAGAAAGCTTGAGTTTTGTGAGGTAGGAGAGATATGGGCTATTCACCCTGGAGCCTATAGTAATCAAGGTTCCCGATATTGTCGAATAGAATGCAAGTCAAAAGAGAGTGTTTCTATCAAGTGGTTGAAGCCAATGCCCATTACTGCTAGTGAGAGAAAATGGTGTGATATTGGCTTGCCTGTTGCTGGTGGATCATTTGAACTAAGTGCAGATATAATCCATGTGAGTAACTTTCCAAATGTTTCATCCCATAAATGCTCATGGATTCGCGGTGTGACAGAGGAACAATTTGAAATTTATCCGAAAAGAGGGGAAATCTGGGCACTATACAAGGATTGGGACCTTGATGAGTGGACATACAACGTTGATTCTGTGAAAGGACACAAAATTGAGTTGGTTGAAATCATGTCTGATTTTTCAAAATATCTTGGTGCAGAAGCCGTTTGTTTGACACAGATAGATGGGTTCAGAAGCGTATTCCAGAGACAGAAAATTGGCGGGCAGGCTCTGACCTTTCACATTCCTCCAGCCAATTTATACATATTCTCTCATGCAGTCCCAGCATATAGGTTCAAAGGGGGAGAACTTCACAATGTTTCTGATCAAATGATTGAGCTTGATCCATTAGCATCACCTGATTATACTAGAGTTGATATCACAACCCAAGAAATACCTGGAAAGAGGAATGTGATTGCTCTTCCTTCTCCAGAAGATATTCTAATTGCAAAGCTTTCGTTTTCCAAGCTTTCCCCAGAAGATGAAGTCTTGAAATCCGGGTGGTGCTCTGATGATTTTGCCATTGGTCAGGTATGGGCTCTATGTTGTGGGGAGGATTGTTTGCCCCGGCAGTACGCCCGAGTTGAACATGTAATTACAGACAGCCTCGTACGTGTGACAGTTCTCAAACCTCTGCCCATTCTGGACATTGAAATTGAGTGGGAGAAAGAAAATCTGCCAATTACATGCGGGATTTTTAAAGCAACTGAAACCAAACTCAATCTCAAAATGTCACAATTCTCACATCCAGTCAAATATCAACAAAGCAATGTTGGATCATACTACAGGATTTACCCACTTAAAGGTGAGATTTGGGCCTTGTACAAGAACTGGCGTGGAAAATGGATGCAGAGTGACATCGGCAGTTGCCAATTCCAAGTTGTACAAGTTCTTTCAGACTTGTCAGATGGAGATGGAATAAAAGTAGCAAGCCTAAAAGAAGTGATGGGTTACCTGACTTTCTTCCACAGGCAACAAGTAGATGGATTTGATCTTGCTCATGTTGTTTCGAAACACGAATTGCTTAGTTTTTCTCACCGAATTCCAGCTTTCAAAGTGCCTGGTATAGGGTGCTATGGCATCCCAGAAAGCTCTTGGCATTTGGAGCCCTATGCTTTACCTCCCAAAGGCAGGATATAG 2229 0.4222 MSPQIAQAFREKKEAEEKIIAKDYVGARDKLLRAQYLFPGIQNIVPMITVTNILAAGNIEFPESGIDYYWVIQLTPNCSSSAVRSRYEKLTALLKPIRSRFPGTDFALKLVHDAFSVLSDYKKRSEYDIKRDSSWEQYKSFSIQLPPLPSQIDSCGETVTSAQSSSVDRVSRLSTSCTMEKSNERAEVILQDDCRRDDIDIDQKPALQKRSHLRTYMSSTTGRKRGGMALSSGSVSSPTVQHAKSGEKKCASLGNTAERRPCQHFFDFESLRKLEFCEVGEIWAIHPGAYSNQGSRYCRIECKSKESVSIKWLKPMPITASERKWCDIGLPVAGGSFELSADIIHVSNFPNVSSHKCSWIRGVTEEQFEIYPKRGEIWALYKDWDLDEWTYNVDSVKGHKIELVEIMSDFSKYLGAEAVCLTQIDGFRSVFQRQKIGGQALTFHIPPANLYIFSHAVPAYRFKGGELHNVSDQMIELDPLASPDYTRVDITTQEIPGKRNVIALPSPEDILIAKLSFSKLSPEDEVLKSGWCSDDFAIGQVWALCCGEDCLPRQYARVEHVITDSLVRVTVLKPLPILDIEIEWEKENLPITCGIFKATETKLNLKMSQFSHPVKYQQSNVGSYYRIYPLKGEIWALYKNWRGKWMQSDIGSCQFQVVQVLSDLSDGDGIKVASLKEVMGYLTFFHRQQVDGFDLAHVVSKHELLSFSHRIPAFKVPGIGCYGIPESSWHLEPYALPPKGRI* 743
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte17g01042 742 SUPERFAMILY Chaperone J-domain 66 133 IPR036869 -
Pte17g01042 742 MobiDBLite consensus disorder prediction 219 241 - -
Pte17g01042 742 Pfam Domain of unknown function (DUF3444) 263 464 IPR024593 -
Pte17g01042 742 Pfam Domain of unknown function (DUF3444) 534 717 IPR024593 -
Pte17g01042 742 ProSiteProfiles dnaJ domain profile. 67 131 IPR001623 -
Pte17g01042 742 PANTHER ENDOSOME ANTIGEN-LIKE PROTEIN, PUTATIVE (DUF3444)-RELATED 149 739 - -
Pte17g01042 742 Gene3D DnaJ domain 63 142 IPR036869 -
Pte17g01042 742 Pfam DnaJ domain 67 128 IPR001623 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte17g01042 Pte-Chr17 25516752 25519634 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte17g01042 2 128 SUVH1 or 3-interacting DNAJ domain-containing protein superfamily AT2G01710 28.148 3.80e-08 54.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte17g01042 - - qsu:111990213 726.087