Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte17g01038 ATGGACCCTGAAGCATTCACAACCAACTTATTCAAGTGGGATCCAAGAGGTGTGGTCTCGGCTACACACATAAACCGGCCGTCTCTTCTGGAGTATGCTGTGCCTCCAACTGCACCTATGCCTGCAACGGGAGCCTACCAAGTTAGGATTCCGAGGGAGCTTGGGGGACTGGAGGAACTGTTCCAGGCTTACGGTATCAGATACTACACCGCTGCCAAGATAGCTGAACTTGGATTCACTGCGAGTACACTTGTCAACATGAAGGACGAAGAACTTGAAGACATGATGAACAGTGTCTGTCAGATATTTCGTTGGGATCTCCTTGTTGGAGAGAGGTACGGTATCAAAGCTGCTGTGAGAGCTGAAAGGAGACGAGTCGAGGAGGAGGACTTGAGACGTCGCAACCTTCTTTCAATTGATACTAACACTACGGACGCGATCGATGCTCTTTCTCAAGAAGGTTTATCGGAGGAGCATGCATTGCAGCAAGAAAAAGAGTTTGTAGGAAGTGGGGGAGGGACCACTTGGGAGTTAGCTGCTGGAGTGGAAAGGAGGAAGATGCAACAGAGAAAGAAGCAAATGTCAAGAATGAAGAGCAACCGTAATTGCCACGGTCATCGCCGTGATGAACATGAGGATGGTGCAGAATGGGATGATGACGAAGAAAATGACGAAGGCAATGGTGGAGGTGGTGGGGATAGCTGCGAGCGACAGAGAGAGCATCCGTTTATAGTGACGGAGCCTGGGGAAGTGGCACGTGGCAAGAAGAATGGACTGGATTACCTGTTTCATCTCTACGAGCAATGCCGTGAATTCTTGGTCCAAGTTCAAAACATAGCAAAAGACCGGGGTGAAAAATGTCCCACCAAGGTTACAAACCAAGTATTTAGGTATGCAAAGAAGGCAGGAGCTAGTTACATTAACAAGCCAAAGATGAGGCACTACGTGCATTGCTACGCGTTGCATTGCCTTGACGAGGAGGCATCCAATGCGTTGAGAAGGGCTTATAAGGAAAAAGGAGAGAATGTCGGAGCATGGAGGCAAGCTTGTTATAAGCCACTGGTGGCAATTGCTGGACGTCAGGGTTGGGATATTGATGCAATATTCAATGCTCATCCCCGTCTGTCCATTTGGTACGTACCCACCAAGCTCCGTCAACTTTGTTATGCTGAGCGTAACCATGCCACAACATCAACCTCCATCTCTGCTGCCGCTGCCGCTGCCGCTGCAGCTGCCGATCACCTCCCTTTTTGA 1254 0.4944 MDPEAFTTNLFKWDPRGVVSATHINRPSLLEYAVPPTAPMPATGAYQVRIPRELGGLEELFQAYGIRYYTAAKIAELGFTASTLVNMKDEELEDMMNSVCQIFRWDLLVGERYGIKAAVRAERRRVEEEDLRRRNLLSIDTNTTDAIDALSQEGLSEEHALQQEKEFVGSGGGTTWELAAGVERRKMQQRKKQMSRMKSNRNCHGHRRDEHEDGAEWDDDEENDEGNGGGGGDSCERQREHPFIVTEPGEVARGKKNGLDYLFHLYEQCREFLVQVQNIAKDRGEKCPTKVTNQVFRYAKKAGASYINKPKMRHYVHCYALHCLDEEASNALRRAYKEKGENVGAWRQACYKPLVAIAGRQGWDIDAIFNAHPRLSIWYVPTKLRQLCYAERNHATTSTSISAAAAAAAAAADHLPF* 418
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte17g01038 417 Pfam Floricaula / Leafy protein SAM domain 53 130 IPR035079 -
Pte17g01038 417 MobiDBLite consensus disorder prediction 179 238 - -
Pte17g01038 417 PANTHER PROTEIN LEAFY 1 405 IPR002910 GO:0003677|GO:0006355
Pte17g01038 417 Gene3D Protein LEAFY 233 402 IPR038276 -
Pte17g01038 417 Pfam DNA Binding Domain (C-terminal) Leafy/Floricaula 230 396 IPR035209 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte17g01038 Pte-Chr17 25484713 25486726 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte17g01038 1 418 Orphan Transcription Factor Family AT5G61850 60.633 4.87e-160 456
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF LFY Pte17g01038 C_LFY_FLO 1.2e-107 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte17g01038 - - qsa:O6P43_030646 572.778