Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte17g01034 ATGGATGATAGCCGCCAACATGAAAATCTGAGACATAAGATGGAGTATTACCGAGGATCACATGCTCCGGTAAGAATGTGGAATATGTCACTTCAGCATCCAGTAAAGGAATCAAATGCTGCTGTTATGAACAAGAAGATTAAATCCATCATTGCAGAGATGGAAGGTGCTATTCAAGAACGAAATGCTGCACTGGCTGAGAAAAATGAAGCCTTGACTGCTCGAGATGAGGCTTTACGTCAGCGTGATGAGGCAATTGCTGAACGAGATGATGCATTGATGGAACGAGATAACGCTCTTGCTGCCCTCCATGTAAGGGATGGTGGTATGAACTTCCATTTAAGTGGTGGTCAATGTGGATCAAAGCGCATGCACCACCCTGCAAGCCAGCTTGGGAGCATGGGAGAAGTTCCTTATAGCTCAAAGGATATGCCAATAACTGATGCCTTCCCTGTTACTATTATTGCTTCTGAAGCTGTCAAGTCACATCAGGAAAAGCGGACAAAGGAGAACAAAGCAATGTCCTCGAAGTCAGGGTATCGACCGTGCAAAGGAAAGAAAGTAGGTGAGGATCTGAATCGGAAGGCTTCGTCAGGGATGAAGATCAAAACTGAATGGGATAGTCACAATGTTGGCTTAAACCTGATAGCATTTGATGAGTCTACCATGCCTGCACCTGTTTGTTCATGCACAGGAACACCAAGGCAGTGCTACAAGTGGGGAAATGGTGGCTGGCAGTCATCTTGCTGTACGACCACACTATCAATGTACCCACTACCACAGCTACCAAACAAACGGCATGCTCGTATTGGGGGGCGGAAAATGAGTGGAAGTGTGTTTACCAGACTGCTTAGTCGTTTGGCAGCAGAAGGCCATGATCTGGCCATACCATTGGATCTCAAAGAGTACTGGGCAAGACATGGTACCAATCGCTACATTACCATTAAGTAG 951 0.4606 MDDSRQHENLRHKMEYYRGSHAPVRMWNMSLQHPVKESNAAVMNKKIKSIIAEMEGAIQERNAALAEKNEALTARDEALRQRDEAIAERDDALMERDNALAALHVRDGGMNFHLSGGQCGSKRMHHPASQLGSMGEVPYSSKDMPITDAFPVTIIASEAVKSHQEKRTKENKAMSSKSGYRPCKGKKVGEDLNRKASSGMKIKTEWDSHNVGLNLIAFDESTMPAPVCSCTGTPRQCYKWGNGGWQSSCCTTTLSMYPLPQLPNKRHARIGGRKMSGSVFTRLLSRLAAEGHDLAIPLDLKEYWARHGTNRYITIK* 317
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte17g01034 316 Coils Coil 62 95 - -
Pte17g01034 316 SMART GAGA_bind_2 1 316 IPR010409 -
Pte17g01034 316 MobiDBLite consensus disorder prediction 161 196 - -
Pte17g01034 316 Pfam GAGA binding protein-like family 18 316 IPR010409 -
Pte17g01034 316 PANTHER - 1 316 IPR010409 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte17g01034 Pte-Chr17 25457550 25460576 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte17g01034 1 317 BBR or BPC Transcription factor family AT2G21240 57.188 2.72e-125 358
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF BBR-BPC Pte17g01034 GAGA_bind 5e-98 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte17g01034 - - qsa:O6P43_030679 508.449