Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte17g01024 ATGGGTGTAAGCCTCCTAGCTCAATCCATGACTCCATCACCTTGTCAGAAGAAACCGAACTCCATGGTTTCTTCCGTCCAGTCCCTTGCTCTTGGGTATGGCAGGAACGGAATGTCAACGCCCAGCCAGAAGAGAAGGAGAGAAAACAGGATTTACATCCTGGAGATTGATAACACCATGGCTACATTTTCAGACAAGTTTCTGATTCTTCTTCATCACCATGGTGGTGGATTTTGCTTTAGTCACCCTGTATGGTTTCTCTATTACCAGTTTTTGTCAAGGCTCGTTTGCACGGCTCGAGTTGACTGTGTCTCTGTCTACTTGCCGTTAGCTCCTGAGTACAAGCTTCCTGCTGCATGTGACGCTGTTTATTCTGCTTTCCTATGGCTTCGCAATGTTGCTAGTAAAGCTCAACTGAGTCTTGACTTCAGCGGTATGGTGATTTCAATCGAGTTTGTCTTGTTGGTGAGAGCGCTGGTATAG 483 0.4638 MGVSLLAQSMTPSPCQKKPNSMVSSVQSLALGYGRNGMSTPSQKRRRENRIYILEIDNTMATFSDKFLILLHHHGGGFCFSHPVWFLYYQFLSRLVCTARVDCVSVYLPLAPEYKLPAACDAVYSAFLWLRNVASKAQLSLDFSGMVISIEFVLLVRALV* 161
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte17g01024 160 Pfam alpha/beta hydrolase fold 70 147 IPR013094 GO:0016787
Pte17g01024 160 Gene3D alpha/beta hydrolase 16 149 IPR029058 -
Pte17g01024 160 SUPERFAMILY alpha/beta-Hydrolases 64 135 IPR029058 -
Pte17g01024 160 MobiDBLite consensus disorder prediction 1 22 - -
Pte17g01024 160 PANTHER ARYLACETAMIDE DEACETYLASE 48 146 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte17g01024 Pte-Chr17 25330477 25332660 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte17g01024 50 130 Carbohydrate Esterase AT5G16080 41.975 5.59e-12 60.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte17g01024 - - jre:109019753 102.449