Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte17g01023 ATGGCAAAAACAACGAGTGATTATGAGATCCAACTTGTTGTAAAGAAACAAGAGCCAAGTCTTGTTCCCCCAGCAGAAGATACAGAGAAAGGCCTATACTTCCTATCAAACCTTGACCAGAACATAGCCGTCCCCGTCCGAACTATTTACTGCTTCAAGTCAGCTTCTAGAGGAAGTGAGGATGCTGCTCGGGTTATCAAGGATTCATTGTCGAAAATTCTTGTCCACTACTACCCATTGGCAGGCAGGTTAACCCTCAGCTCCGAAGGGAAGCTGATAGTAAATTGCACCGGAGAAGGTGCGGTTTTTGTTGAGGCTGAAGCTGACTGTAAGATGCAGGACATAGGAGACATGACAACGAAGCCTGATCCTGTGACTTTGGAAAAACTTGTCTGTGACATGCCTGGTGCAAAAAACATACTTGAGATACCTCCCCTAATGACTCAGGTGACAAAGTTCAAATGTGGGGGATTTATCTTTGGCCTATTAGTGAACCATTGTATGTTTGATGGTTTAGGTGCCATGGAATTTTTGAATGCATGGGGTGAGACGGCCAGAGGACTTCCCTTAATGACCAAACCATTTCTAGACAGAACCATACTGAAAGCTCGGAATCCACCAAAATTAGATTTCGAACACCATGAGTTCGCTGAAATTGACTATGGATCCAACATTCACCAACTATACGAGGAAGAAATGCAGTACAAATCCTTCCTTTTCGAACCTGACATGCTTCTGCGGCTAAAGCGAAAAGCCATGGAAGATGGGATGTTGGATAAGTGCACGACTTTTGAAGCACTTTCAGCTTTTGTCTGGAGAGCTCGAACGAGAGCCTTGAGAATGAAGCCTGACCAACAAACGAAGCTCCTCTTTGCTGTTGATGGCAGGTCTAGATTTGAGCCTCCAATCCCAGAGGGATACTTTGGCAATGCAATTGTGTTGACCAATTCTCTTTGTTCTGCTGGTGAGCTGCTAGATAAGCCATTTTCGCATGCAGTTGTTCTAGTTCAGAAAGCAATTAACATGGTTACAGATAGCTACATAAGATCAGCCATAGACTACTTTGAAATAACAAGAGCCAGACCTTCATTGGCTGCAACTCTTCTGATCACAACTTGGTCGAGGTTGTGTTTCCACAGGACAGATTTTGGCTGGGGAGAGCCTGTATCTTCTGGACCGGTATCCTTGCCGGAGAAGGAAGTGATACTGTTCCTTTCACATGGGAAAGAGAGGCAAAGCATAAATGTGCTTCTGGGATTGCCTGCTTCTGCCATGACCACTTTTGAAGCTCTGGTGCATATCTGA 1305 0.4483 MAKTTSDYEIQLVVKKQEPSLVPPAEDTEKGLYFLSNLDQNIAVPVRTIYCFKSASRGSEDAARVIKDSLSKILVHYYPLAGRLTLSSEGKLIVNCTGEGAVFVEAEADCKMQDIGDMTTKPDPVTLEKLVCDMPGAKNILEIPPLMTQVTKFKCGGFIFGLLVNHCMFDGLGAMEFLNAWGETARGLPLMTKPFLDRTILKARNPPKLDFEHHEFAEIDYGSNIHQLYEEEMQYKSFLFEPDMLLRLKRKAMEDGMLDKCTTFEALSAFVWRARTRALRMKPDQQTKLLFAVDGRSRFEPPIPEGYFGNAIVLTNSLCSAGELLDKPFSHAVVLVQKAINMVTDSYIRSAIDYFEITRARPSLAATLLITTWSRLCFHRTDFGWGEPVSSGPVSLPEKEVILFLSHGKERQSINVLLGLPASAMTTFEALVHI* 435
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte17g01023 434 Gene3D - 9 218 IPR023213 -
Pte17g01023 434 Pfam Transferase family 14 429 - -
Pte17g01023 434 FunFam Spermidine hydroxycinnamoyl transferase 12 216 - -
Pte17g01023 434 Gene3D - 223 432 IPR023213 -
Pte17g01023 434 PANTHER TRICHOTHECENE 3-O-ACETYLTRANSFERASE 21 430 - -
Pte17g01023 434 FunFam Tryptamine hydroxycinnamoyl transferase 221 433 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte17g01023 Pte-Chr17 25306366 25308031 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte17g01023 14 432 Monolignol Biosynthesis Gene Families AT5G48930 33.486 1.08e-80 254
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte17g01023 K15400 - qsa:O6P43_023540 686.797
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pte17g01023 17 25306366 25308031 Pte9g01296 9 34384053 34386670 RCT
Pte17g01023 17 25306366 25308031 Pte2g00439 2 3408636 3411450 RCT
Pte17g01023 17 25306366 25308031 Pte17g01023 17 25306366 25308031 RCT