Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte17g01022 ATGAAGACAAAATTTTCTCTCCATTCAAAAGTCAGGTCTTCTGTTTCGGGCTGGCCTCAGGCATTTTGGGGTTTGCCGCCATCCTCAGAAAACTCAGAAGAAGAACTAGCTGAGGCCCTTGAGAAAGGTGTTAGAGCTGCTCCAGCTCCTGTTAAAAAGAAACATGTACTCCCATTTCATTGGTCACAGCTCAAACTCAAGACAGTTACATTTAGGACTCCCATGACTGCCAAACTGAAATTTAGTTCTGTCCAACACTGGAGCAGGTTGTTTGAGGGTCGTCCAAAGCAGTTTGGAATAGGCGGAGCTTTGCCCCCAAAGAGAGACTTGTTAAATGGCCAAAAGTTGTGCGCCTCAACGAATTTGTTTAAGCTGCTCCTCAAGTACCGACCAGAGGACAAAACAGCCAAGAATGAGCGCCTTCTGAAAAGGGCTCAAGCAGAAGCTGAGGGGAAACCTGTTGAAGCGAAGAAACCCATTGTTGTGAAGTATGGCCTCAACCATATAACCTACCTCATTCAGCAGAATAAGGCTCAAATCGTCGTGATTGCTCATGATATAGACCCAATTGAGCTAGTTGTTTGGCTTCCTGCGTTGTGCAGAAAGAAGGTAATCCCTTACTGCATTGTCAAGGGGAAATCACGTTTAGGAGCGGTAGATTTTCTGAACTGA 672 0.4554 MKTKFSLHSKVRSSVSGWPQAFWGLPPSSENSEEELAEALEKGVRAAPAPVKKKHVLPFHWSQLKLKTVTFRTPMTAKLKFSSVQHWSRLFEGRPKQFGIGGALPPKRDLLNGQKLCASTNLFKLLLKYRPEDKTAKNERLLKRAQAEAEGKPVEAKKPIVVKYGLNHITYLIQQNKAQIVVIAHDIDPIELVVWLPALCRKKVIPYCIVKGKSRLGAVDFLN* 224
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte17g01022 223 SUPERFAMILY L30e-like 122 218 IPR029064 -
Pte17g01022 223 Gene3D - 109 220 IPR029064 -
Pte17g01022 223 PANTHER RIBOSOMAL PROTEIN L7AE FAMILY MEMBER 122 218 - -
Pte17g01022 223 ProSitePatterns Ribosomal protein L7Ae signature. 200 217 IPR004037 GO:0042254|GO:1990904
Pte17g01022 223 PRINTS Ribosomal protein L7A/RS6 family signature 197 207 IPR018492 -
Pte17g01022 223 PRINTS Ribosomal protein L7A/RS6 family signature 181 194 IPR018492 -
Pte17g01022 223 PRINTS Ribosomal protein L7A/RS6 family signature 162 176 IPR018492 -
Pte17g01022 223 PRINTS Ribosomal protein L7A/RS6 family signature 207 221 IPR018492 -
Pte17g01022 223 Pfam Ribosomal protein L7Ae/L30e/S12e/Gadd45 family 149 219 IPR004038 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte17g01022 Pte-Chr17 25294981 25296780 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte17g01022 90 219 Cytoplasmic Ribosomal Protein Gene Family AT3G62870 66.049 3.22e-67 206
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte17g01022 K02936 - qsa:O6P43_016716 211.846