Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte17g01018 ATGGAGACTGGGTCACAGCTTTATATTGATGCTGAAGCGCTTCCAGAACCTCTTACAAATGAGAGTGGAGCCCCTACTTTTTCTTCATCCACCTCAATTGATGTCATGCCCCCGCAACAAGTGAAAAAGGTTACTAGGCAGTGGGCTGCTTGGACTCATCAAGAGGAAGAAAACTTTTTCAATGCTTTGCGTCAAGTTGGCAAGAATTTTGACAAGATCACATGCAGGGTTCAGAGTAAGAACAAGGATCAGGTTAGACACTACTATTACCGGCTTGTGAGGAGGATGAACAAGCTGCTGGGACCAGGATTATGCCTGGACCCCAAGAACTCTAAGGATACAAATGCAGCAATGCTCCGGTGGTGGTCTTTGTTAGAAAAGTATAGTTGCAAAGCTTCAAAGCTTCACTTGAAACCACGGAGATTTAAAATATTTATAGAAGCCTTGGAGCTCCAACTTTTAAAGGATCGTAAGAAGAACATAAGCAGAAGACTATTGCAGGGGGAAAACTGTAATCCTACTGCCCCCGGAGCTATTCCCAATCAGAGTAGAGCATTGGGGAATGATGTCCGTTCAGTTAAATTAGTTTTTGTTGACAGTCAAAATATTCAAAAGTTGGGACCAAGAAAAGCATCACTGAAGCGCAATGCGAACATGGGTGTTAACTGTATTAACAAAAAGGGAGAGTTAGATAGCGTCAAACATTTAAGACAACGAAGAAAACCAGGTACAACTTCTGCGGCTGCATATAAAAAATGGGAGAAAGCTGCAATTGCCGGAGTCTCTTTAGTTGCAGATGCTGCTGTACACTTGGAGCAAACTGCTACCACTAAAGAGATAAAAGATAACGAAAATAATCCAGGGAGGAAGTGCAATGCTGATGTTCAAAGTGATCTACCTTCATTGCCTACTTTTCCAAAAATTCACTTCATGGTTGATAGAAATGGACCTAATCCAGCTAAACTTAAGCTCCAATTATTCCCAATTGATGATGGAACAAGAAGAGCCTTGGAGATGGATAAATATAATCCTTACCTCGAGCTTACTCTTAGCTCTAAGAAGAAGATATCATCTGTTTTGGATCATCTTAATAAGAAATGGGGAGATTCAAGTGCAGCAGCTGGAGAGTTAATGCTTTTACCTTACAACACTCAAAACGGAAACTCAGCTAGTTATCAGAGATGGACACTTGATTCTATTCTCAGTGCAGCAGATGTATATACAATTCTTGGAAGTCCTCAAGTTTTCCGCTTAAGGTATGGTTGGTTTTCTAATTTTGGAGTTGGTTCAGCAAGTATGCAAGGGAACATGGAATCTGGCTATACACTAGATGAGTCTAACAAAAGCAACACTATCTTTAATACAGCTAACAAAATTGATCAGGTTACAGATTCAGCTTCTCTCTCTGTCTCTTCTACCAATGATATGTCCCCCAAGCATCAAGCAACATGTATAGCCAGAGATCATGCTCAAGCTGCTACTCCAGCTGATCTTCCTAGTATGATTGATGATCATAAATATTCCAACCCAAGGATTGACATTGCAAAGTTCTCTGATCTGGAACCAAATGTATCTTGTAAGGGAGATGATCGTAGTTATTTTAGGATGACACTGCAAAAGGAAGATATGGATGATGCAAGAGAGAAAGGGTTATCAGCCTGTGAATGGGCCGATAGCCTTACGAACATTAGCGTTGGAGATCTACTTTCAGGAGTTGCCCATGATATTGTGGATGACTGCATGGATGCACCTGTTGCTGAAAGCTCTTGTTGCATGCATCAAGTTCCATTCTGCAGTGATTCTTTCGATGCTGCTATTGCTGCTCACATATCTCGTCAACAAGATAAGACTGTTCCTAGACAAACATTGGCATCAAATATCTCTTCAATATGGGATGGGGAAGAAACTTGTGATGCTTTCTCATTTAAAAAGGATACTGTTCTCCTTGAAGATTGTACCAGTTTTTCTGCTGTCACCTCCTTAGAAAGCAGCAAACAGCTCCCCAGAAACTGTTCTGAGTGCTCTGGGAACAACGTTGAGAATCTGCCAGAAGTTGGAGGAGAAGCCAAAGATGAGTTTCTTTCTGATCCATCTGTCCTGGATAATACAGCAACAGACGCCAATGGGCTAACTGATATGTATTGGCCCGATTCTTTGGGACCATTGGATCTTGATATACAGTGTTCCAAATACCATAGTGAAGATATGATTTTAAGTGATAGCCTTAGTGGTCTCAATCGGTTGATAGCCAGCAGTCTGGATGCATTTCAAAACTTTTCTTTTTTTGGGTACGACAAAAAGGAAGTATCACCAACGGTTGAAGCTCGTGGAATTGCATCCGTTTCTGATGTTAAAGTTAGCAGTGAAGTCTGA 2373 0.4117 METGSQLYIDAEALPEPLTNESGAPTFSSSTSIDVMPPQQVKKVTRQWAAWTHQEEENFFNALRQVGKNFDKITCRVQSKNKDQVRHYYYRLVRRMNKLLGPGLCLDPKNSKDTNAAMLRWWSLLEKYSCKASKLHLKPRRFKIFIEALELQLLKDRKKNISRRLLQGENCNPTAPGAIPNQSRALGNDVRSVKLVFVDSQNIQKLGPRKASLKRNANMGVNCINKKGELDSVKHLRQRRKPGTTSAAAYKKWEKAAIAGVSLVADAAVHLEQTATTKEIKDNENNPGRKCNADVQSDLPSLPTFPKIHFMVDRNGPNPAKLKLQLFPIDDGTRRALEMDKYNPYLELTLSSKKKISSVLDHLNKKWGDSSAAAGELMLLPYNTQNGNSASYQRWTLDSILSAADVYTILGSPQVFRLRYGWFSNFGVGSASMQGNMESGYTLDESNKSNTIFNTANKIDQVTDSASLSVSSTNDMSPKHQATCIARDHAQAATPADLPSMIDDHKYSNPRIDIAKFSDLEPNVSCKGDDRSYFRMTLQKEDMDDAREKGLSACEWADSLTNISVGDLLSGVAHDIVDDCMDAPVAESSCCMHQVPFCSDSFDAAIAAHISRQQDKTVPRQTLASNISSIWDGEETCDAFSFKKDTVLLEDCTSFSAVTSLESSKQLPRNCSECSGNNVENLPEVGGEAKDEFLSDPSVLDNTATDANGLTDMYWPDSLGPLDLDIQCSKYHSEDMILSDSLSGLNRLIASSLDAFQNFSFFGYDKKEVSPTVEARGIASVSDVKVSSEV* 791
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte17g01018 790 Gene3D - 51 114 - -
Pte17g01018 790 SMART sant 47 95 IPR001005 -
Pte17g01018 790 FunFam TSL-kinase interacting protein 1 51 112 - -
Pte17g01018 790 ProSiteProfiles SANT domain profile. 51 97 IPR017884 -
Pte17g01018 790 MobiDBLite consensus disorder prediction 21 35 - -
Pte17g01018 790 SUPERFAMILY Homeodomain-like 43 97 IPR009057 -
Pte17g01018 790 CDD SANT 50 93 IPR001005 -
Pte17g01018 790 PANTHER CRAMPED PROTEIN 32 763 - -
Pte17g01018 790 MobiDBLite consensus disorder prediction 14 35 - -
Pte17g01018 790 Pfam Myb-like DNA-binding domain 50 92 IPR001005 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte17g01018 Pte-Chr17 25252082 25258464 Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Pte17g01018 Myb_DNA-binding 4.1e-07 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte17g01018 - - qsu:111990298 850.892