Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte17g01013 ATGTCTTCTAGCAAAAAGAGCCGCCTGAAAACCCTACTCACAGCAAATGCAGGCTGTGGCTGTGGCAGGCCAAAGCTCTCAGACGTAAAGGAACCCCGCCCTAAACATAAAGTGATTTCCATTTTCCACAATCCAAATCCTCGCAGCCATACTTCATCAATTTCTGCAGAAAGAAACGGTGGTCTTTCTATGGAAGATGATGATGATTTAACTTCTACTACAATCTCTGAAGCGGAGACTGACCACAAGATCAGTGCAACTTGCTCGAAGAGTATTACTCCTAACGAATGCAACAAACTCATTGATAGCATAGCAGTTGAAAAGGATTCAGAAAATCCATACAAAGATTTCAGACATTCTATGCTTCAAATGATATTCGAGAAAGAGATTTTCACAGAGAATGATCTTCAACAGCTACTTAGCCGCTTTCTTGAGCTAAACTCACCATGTCATCACCAGATCATTATCAAGGCCTTCACTGAGATCTACCGACAGGTCTTCGCCAAGAGGGTGTAG 516 0.4244 MSSSKKSRLKTLLTANAGCGCGRPKLSDVKEPRPKHKVISIFHNPNPRSHTSSISAERNGGLSMEDDDDLTSTTISEAETDHKISATCSKSITPNECNKLIDSIAVEKDSENPYKDFRHSMLQMIFEKEIFTENDLQQLLSRFLELNSPCHHQIIIKAFTEIYRQVFAKRV* 172
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte17g01013 171 ProSiteProfiles OVATE domain profile. 106 165 IPR006458 -
Pte17g01013 171 PANTHER TRANSCRIPTION REPRESSOR OFP7-RELATED 52 167 IPR038933 GO:0045892
Pte17g01013 171 MobiDBLite consensus disorder prediction 40 69 - -
Pte17g01013 171 NCBIfam uncharacterized plant-specific domain TIGR01568 104 164 IPR006458 -
Pte17g01013 171 MobiDBLite consensus disorder prediction 44 59 - -
Pte17g01013 171 ProSiteProfiles Prokaryotic membrane lipoprotein lipid attachment site profile. 1 21 - -
Pte17g01013 171 Pfam Transcriptional repressor, ovate 110 166 IPR006458 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte17g01013 Pte-Chr17 25223665 25224592 Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF OFP Pte17g01013 Ovate 9.4e-21 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte17g01013 - - cave:132164472 182.57
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pte17g01013 17 25223665 25224592 Pte17g01013 17 25223665 25224592 RCT