Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte17g01012 ATGAAGGTCCCATCCTTGTTCAAGAGAAACAAGGTCAATCCATGGAAATTGCCCTCGCTCAAGCACCTGAAAACTACATTGTCACCCAGAAAGATAATCTTTGAGAACGCCGGCGATGTTATATCCGATGCTGCCAAGTTCCTGGATATTACTGATGCATCATGGTCTCAGTCAACAAGCATTGCAGCAAAACATAATGACTCAGGAGAAGAACTGTTAGAGGCTGCATTGAAGTCAAGAAGGCTGACACGTACAATAGAGCCAGGGACCACTTCAAGCTCAATTCTTGGGGCAACGTTTTTCCCGTACCAAGAGTTCAGGGTGGAAAGTATAGACACTGAGAATCCCTATGTTGATTTCCGCAATGCAATGGAAGAGATGGCAAATGATTACGGAGTTTATAGTTTTGAGGAAAAGCATGAAAGGTATTTAGAGGAGTTGCTGTCGTGGCACTTGAGGATGAACAGGAAGGAAAACCATGGGTACATAGTTCAGGCTTTCATTGATATGTTTGCTGGGTTACTTCCTCCTTCCTTCTCTTCTAGTTCGTCATTCAAGTCACAAGATGGTTGGGACATCTAA 582 0.4364 MKVPSLFKRNKVNPWKLPSLKHLKTTLSPRKIIFENAGDVISDAAKFLDITDASWSQSTSIAAKHNDSGEELLEAALKSRRLTRTIEPGTTSSSILGATFFPYQEFRVESIDTENPYVDFRNAMEEMANDYGVYSFEEKHERYLEELLSWHLRMNRKENHGYIVQAFIDMFAGLLPPSFSSSSSFKSQDGWDI* 194
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte17g01012 193 PANTHER TRANSCRIPTION REPRESSOR OFP7-RELATED 84 174 IPR038933 GO:0045892
Pte17g01012 193 ProSiteProfiles OVATE domain profile. 108 173 IPR006458 -
Pte17g01012 193 Pfam Transcriptional repressor, ovate 114 173 IPR006458 -
Pte17g01012 193 NCBIfam uncharacterized plant-specific domain TIGR01568 110 175 IPR006458 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte17g01012 Pte-Chr17 25221517 25222098 Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF OFP Pte17g01012 Ovate 7.5e-16 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte17g01012 - - qsa:O6P43_028570 194.897