Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte17g00994 ATGGAGAAAGTGGTGCCGGAGGCAGAGGAGCTGCCTAAGGCTATCGTGCGCCGTGTAGTCAAGGATGCGCTGTCGCGGTGCTCAGACGATGGGGACATGTCTATTCACAGCAATGCCCTCACCGCTTTCGCTGAAAGCGCCCGAATCTTCATCCATTACGTCTCCGCCACGGCCAACGATATATGTAAGGAGTCGAAGAGACAGACGATAAACGCTGATGATGTGTTCAATGCACTTGAAGAGATTGAGTTCACTGAATTTGTCCGCCCTCTGAAAGCTTCTCTTGAAGGTGATTTCATTTCAATATATATGATATGA 318 0.4906 MEKVVPEAEELPKAIVRRVVKDALSRCSDDGDMSIHSNALTAFAESARIFIHYVSATANDICKESKRQTINADDVFNALEEIEFTEFVRPLKASLEGDFISIYMI* 106
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte17g00994 105 PANTHER DNA POLYMERASE EPSILON SUBUNIT 3 7 96 - -
Pte17g00994 105 Gene3D Histone, subunit A 2 97 IPR009072 GO:0046982
Pte17g00994 105 SUPERFAMILY Histone-fold 11 96 IPR009072 GO:0046982
Pte17g00994 105 Pfam Histone-like transcription factor (CBF/NF-Y) and archaeal histone 10 79 IPR003958 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte17g00994 Pte-Chr17 25072740 25073893 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte17g00994 11 96 CCAAT-HAP3 Transcription Factor Family AT5G47640 36.047 6.84e-12 57.4
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NF-YB Pte17g00994 CBFD_NFYB_HMF 5.8e-10 CL0012
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte17g00994 K02326 - qsa:O6P43_000470 160.614
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pte17g00994 17 25072740 25073893 Pte17g00994 17 25072740 25073893 RCT