Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte17g00988 ATGGGGAGCCACAGAGTTGGGGAGATTGGTCTTTCGGAGTCTGGAACTTCAAATCATCATATTCCTTATGGAATTCCGCATGGACCTAATGCTCCTTCCACAAGTTTCATTAATCAAGGAGGGTCTGCTTTTGATTTCGGAGAGCTGGAAGAGGCCATTTTTCTGCAAGGAGTTAAGTTCAGAAATGATGAAGCTAAAGCACCTTTATTCGCAGGAAGGCCTGCAGCTACACTGGATATGTTCCCTTCTTGGCCAGGAAGCTCAAAGTCAGGAGGAGAAAGCACTGATTCAGGATCAGCAGCAAACACTCTTTCAAGCAAGACTGAAACACATTTCGAGCCAGAATCACCTATTAGCATAAAGGCAACAACGTCTTTCGATCAGCAAGCTTTATATCAGAACCATCTGCAGCTTCAACAACCACAGCAGCAACACCAACAATTACACTTACAACAGGAGATGGCAAATGATAACTCAAGAACAGGCACATCATCACAGAATCAATCAGCTGCCAAAGCACAGATTGAAAAGAGAAAGGGAGCTGGTTCCACATCTGAGAAACAACTTGATGCCAAGTCATTGCGACGTTTAGCTCAAAACAGAGAAGCTGCAAGGAAAAGCCGTCTCAGGAAGAAGGCCTATGTTCAACAATTAGAGTCAAGCAGAATGAAGCTCACTCAGATTGAACAAGAATTGCAAAGAGCACGGTCTCAGGGACTTTTCTTGGGCTGTGGAGGTGCTGGAGGTCATATAAGCTCAGGAGCTGCGATTTTTGACATGGAATATCAAAGCTGGTTAGAAGACGACCACCGTCACATGGCGGAGCTCCGGACAGGTTTGCATGCACTGTCTGACAGTGACCTGAGACTTATAGTGGATGGATATCTTCAACACTATGATGAGATTTTCCGGCTGAAGGGAGTGGCTGCCAAAACAGATGTGTTCCACCTTATCACTGGGATGTGGACAACGCCAGCTGAGCGCTGCTTCCTTTGGATGGGAGGCTTTAGGCCTTCAGATCTGATAAAGATGTTGATACACCAACTTGAGCCTCTAGCGGAGCAGCAGATCGTGGGAATCTACAGTCTTCAACAGTCGTCGCAGCAGGCTGAGGATGCTCTCGCTCAAGGCCTAGAACAGTTGCAACAGTCTCTTGTTGAAACTGTAGCTGGTGGTCCTGTCATTGACGGTGTACAGCAGATGGTGGTTGCCATGAGCAAGCTTGATAATCTTGAGGGCTTTGTCCGTCAGGCTGATAATTTGCGACAACAAACCCTTCACCAGTTACGCCGGATATTGACAGTCCGACAAGCTGCACGGTGTTTTCTAGTGATTGGAGAGTACTATGGCCGACTGCGAGCCCTCAGCTCTCTTTGGGCGTCACGGCCAAGAGAGACGATGATCAGCGAGGATAATTCATGCCAGACGACTACGGATTTGCAGATGGTTCAACCTTCTCAGCATCATTTTTCAAGCTTTTAG 1482 0.4717 MGSHRVGEIGLSESGTSNHHIPYGIPHGPNAPSTSFINQGGSAFDFGELEEAIFLQGVKFRNDEAKAPLFAGRPAATLDMFPSWPGSSKSGGESTDSGSAANTLSSKTETHFEPESPISIKATTSFDQQALYQNHLQLQQPQQQHQQLHLQQEMANDNSRTGTSSQNQSAAKAQIEKRKGAGSTSEKQLDAKSLRRLAQNREAARKSRLRKKAYVQQLESSRMKLTQIEQELQRARSQGLFLGCGGAGGHISSGAAIFDMEYQSWLEDDHRHMAELRTGLHALSDSDLRLIVDGYLQHYDEIFRLKGVAAKTDVFHLITGMWTTPAERCFLWMGGFRPSDLIKMLIHQLEPLAEQQIVGIYSLQQSSQQAEDALAQGLEQLQQSLVETVAGGPVIDGVQQMVVAMSKLDNLEGFVRQADNLRQQTLHQLRRILTVRQAARCFLVIGEYYGRLRALSSLWASRPRETMISEDNSCQTTTDLQMVQPSQHHFSSF* 494
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte17g00988 493 ProSiteProfiles DOG1 domain profile. 255 462 IPR025422 GO:0006351|GO:0043565
Pte17g00988 493 PANTHER TRANSCRIPTION FACTOR TGA9 137 465 - -
Pte17g00988 493 Pfam bZIP transcription factor 191 230 IPR004827 GO:0003700|GO:0006355
Pte17g00988 493 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 190 234 IPR004827 GO:0003700|GO:0006355
Pte17g00988 493 Pfam Seed dormancy control 272 346 IPR025422 GO:0006351|GO:0043565
Pte17g00988 493 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 195 210 IPR004827 GO:0003700|GO:0006355
Pte17g00988 493 Gene3D - 191 240 - -
Pte17g00988 493 MobiDBLite consensus disorder prediction 138 194 - -
Pte17g00988 493 MobiDBLite consensus disorder prediction 179 194 - -
Pte17g00988 493 CDD bZIP_HBP1b-like 192 243 - -
Pte17g00988 493 MobiDBLite consensus disorder prediction 138 173 - -
Pte17g00988 493 Coils Coil 211 238 - -
Pte17g00988 493 MobiDBLite consensus disorder prediction 1 36 - -
Pte17g00988 493 SUPERFAMILY Leucine zipper domain 192 235 IPR046347 GO:0003700|GO:0006355
Pte17g00988 493 MobiDBLite consensus disorder prediction 81 116 - -
Pte17g00988 493 SMART brlzneu 188 264 IPR004827 GO:0003700|GO:0006355
Pte17g00988 493 MobiDBLite consensus disorder prediction 83 116 - -
Pte17g00988 493 FunFam BZIP family transcription factor 191 240 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte17g00988 Pte-Chr17 25017591 25037155 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte17g00988 154 494 bZIP Transcription Factor Family AT1G08320 74.052 0.0 528
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Pte17g00988 DOG1 1.6e-29 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte17g00988 K14431 - pop:7460056 731.865
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pte17g00988 17 25017591 25037155 Pte17g00988 17 25017591 25037155 RCT