Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte17g00983 ATGGCTGAAGAACATAGGTGCCAGGCTCCGCGTTTATGCGTGAACAACTGCGGTTTCTTTGGGAGCCCAGCAACGCAAAACCTGTGTTCTAAATGTTACAGAGATTTGCAGCTTAAAGAACAACAATCGTCGTCTGCGAAAATTGCTCTGAATCAATCCCTCCATCCTTCTTCCTCAATGGCCTTGCCTGCATCATTGACGGTACCACCGCCTCCTGACTTTGTTTCTATTGCGTCATCTTCACAACCGGTGGTCGATCTGCCGGCTGCCATCAAGAAGGAGAAGGATGTACCTGTAGTGATGTCACAGCCCGGTAGGTGCATGACGTGCAGGAAGCGCGTGGGGCTTACGGGGTTCAAGTGTCGGTGCGGGTTATCTTTTTGTGGGTCGCACCGATACCCGGAAAATCACAACTGCGAGTTTGATTTCAAGGGTATGGGTCGGGAGCAGATCGCAAAAGCGAACCCGCTGGTGAAGGCAGATAAGCTCGAAAAGATATAA 501 0.507 MAEEHRCQAPRLCVNNCGFFGSPATQNLCSKCYRDLQLKEQQSSSAKIALNQSLHPSSSMALPASLTVPPPPDFVSIASSSQPVVDLPAAIKKEKDVPVVMSQPGRCMTCRKRVGLTGFKCRCGLSFCGSHRYPENHNCEFDFKGMGREQIAKANPLVKADKLEKI* 167
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte17g00983 166 Gene3D - 78 162 IPR035896 -
Pte17g00983 166 FunFam Zinc finger AN1-type containing 6 80 162 - -
Pte17g00983 166 Pfam AN1-like Zinc finger 107 143 IPR000058 GO:0008270
Pte17g00983 166 ProSiteProfiles Zinc finger A20-type profile. 7 41 IPR002653 GO:0003677|GO:0008270
Pte17g00983 166 SUPERFAMILY AN1-like Zinc finger 91 161 IPR035896 -
Pte17g00983 166 Gene3D - 1 59 - -
Pte17g00983 166 SUPERFAMILY Glucocorticoid receptor-like (DNA-binding domain) 12 58 - -
Pte17g00983 166 Pfam A20-like zinc finger 11 34 IPR002653 GO:0003677|GO:0008270
Pte17g00983 166 ProSiteProfiles Zinc finger AN1-type profile. 101 147 IPR000058 GO:0008270
Pte17g00983 166 PANTHER AN1-TYPE ZINC FINGER PROTEIN 9 166 - -
Pte17g00983 166 SMART AN1_Zf_4 107 144 IPR000058 GO:0008270
Pte17g00983 166 SMART A20_3 10 34 IPR002653 GO:0003677|GO:0008270
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte17g00983 Pte-Chr17 24985674 24987696 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte17g00983 1 167 C2H2 Transcription Factor Family AT3G52800 51.412 1.11e-48 153