Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte17g00980 ATGCAGCATTACATAGTTTACATGGGACATCATGAACACCCTAACTCAGATTCAGTGGTACAAGCAAACCATGAAATGCTTGCTTCAGTCACAGGAAGTTTAAGCGGAGCAAAATTAGCTGCAATTCACCACTACAGCAAAAGTTTCCGAGGATTCTCAGCTATGCTTACACCAGAGCAAGCTGAAAGGCTCACAGGGCAAGATTCAGTTGTGTCTGTATTTAAAAGCAGGATGAACAAGCTACGTACTACACATTCATGGGACTTCATGGGACTAAACTCCATGTTACAGGGAAAACTGCAGGAAATGGACTCAAGTTCTGATGTCATCGTTGGCGTCCTTGACTCGGGAGTCTGGCCCGAGTCTAGAAGCTTCAGTGACGAGGGACTCGGTCCAGTGCCTAAGAAATTCAAGGGAGAGTGTGTCCCTAGCGTAAATTTTAACTGTAATAGGAAAATCATTGGTGGTCGGTATTATTTTCAAGGGTATGAAGTAGAAAATGGTCCACTTGAAAGTTCTGGTGAAACTTTCTTCCGTTCAGCTAGAGACAATGACGGGCATGGAAGTCACACTGCTTCAACAATTGCAGGATCTGTTGTGAAAAATGTCGACTTTTTTGGAATGGCCGCCGGTACTAGCAGAGGGGGTGCACCAAGTGCCAGACTTGCTATCTACAAAGTCTGTTGGTTTAATTGGTGCAGTGACGCTGACGTTCTTGCAGCCCTTGACGATGCAATCAATGACGGTGTTGATATGCTATCTCTTTCCCTTGGCCCTGATCCACCACAACCATCTTACTTTGAAGATGTCATATCTATTGGAGGATTCCATGCATTCCGGCATGGAATTCTTGTTTCTGCTTCCGCTGGAAACTCAGGTTTGCCACGAACTGCAGCAAATGTCGCTCCTTGGATCCTCACTGTTGCTGCTAGCACAATTGACAGAGAATTCAATTCAGACATACATATTGGAAACTCGAAAGTTCTCAAGGGCTTCTCATTAAATCCATTAGAAATGAGAGAATCTTATGAATTGATAGCTGGAAGTGATGCGGCAGCACCTGGAGTACCAGCAAGGAATGCTAGCTTCTGCAAGAACAATACTCTCGACCACTCATTGATCAAAGGAAAAATAGTGGTGTGCACGACTGAAACGATTATTGGTGATAATCGGGGAGAGAAAAGCATGTTTGTAAAACAAGGGGGTGGAGTTGGAATGATTCTAATTGATCCACCTCTTAAAGGTATTGGGTTCGAATATTACCTTCCGGCTACTCTCATAGCCCAAGAAGAAGCAGAACAGCTTCAAGCATACATGAAGACAGAAAAGATCCCCGTAGCCAGAATATCTCCAACTGTGACAATCCTGAAAAGTAGACCTGCACCACGAGTAGCAATTTTTTCTTCAGCTGGACCAAATATCATAACTCCTGATATCATTAAGCCAGATATAACAGCACCAGGGGTGAATATTTTGGCAGCATGGACTCCAGTGCCAACTCCGTCTACAGTTGGTCGATCAATCGACTACAATATAATATCCGGAACTTCAATGTCCTGTCCTCACGTTACTGGGTTAGCAGCAATCATAAAATCTCAAAGGCCACACTGGAGTCCAGCAGCAATAAAATCTGCAATAATGACAACTGCAACAATCATGGACGACTCAGTACACCAAATTGGAAGAGATCCAGAGAGAATTCAGGCTACACCATTTGACTTTGGGGCTGGACATATCAATCCCGTCGCTTCATTAAATCCAGGGCTAGTTTATGACTTTCATGCTGGAGATGTTATCATTTTTCTCTGCAGTGTGGGTGCAAGTCCTGCACAGCTTAAAAATCTTACTGGACAACCACTTCAATGTCCAAATGACCCAATACCCTCCTATAATTTCAATTATCCTTCGATTGGTGTGTCCAATCTGAAAGGACCTGTATCTGTGAAACGAACTGTTACTTACTACGGCAATGGACGCACAGTATATACTGCAAATGTAATACCTCCTGATGGTGTACATGTTACTGTTAATCCATCTCAACTCGAGTTCACAAACGAAGGTGAAAAAAGGTCTTTCCGTGTTGAATTTAATCCTCTGAGAAACAGCAACGGGAGTTTTGTGTTTGGGTCCTTGACATGGACCAATGGGATACATAGAGTAAGGAGTCCTATAGGGCTTAATGTAATTTCTGTCTAG 2196 0.4335 MQHYIVYMGHHEHPNSDSVVQANHEMLASVTGSLSGAKLAAIHHYSKSFRGFSAMLTPEQAERLTGQDSVVSVFKSRMNKLRTTHSWDFMGLNSMLQGKLQEMDSSSDVIVGVLDSGVWPESRSFSDEGLGPVPKKFKGECVPSVNFNCNRKIIGGRYYFQGYEVENGPLESSGETFFRSARDNDGHGSHTASTIAGSVVKNVDFFGMAAGTSRGGAPSARLAIYKVCWFNWCSDADVLAALDDAINDGVDMLSLSLGPDPPQPSYFEDVISIGGFHAFRHGILVSASAGNSGLPRTAANVAPWILTVAASTIDREFNSDIHIGNSKVLKGFSLNPLEMRESYELIAGSDAAAPGVPARNASFCKNNTLDHSLIKGKIVVCTTETIIGDNRGEKSMFVKQGGGVGMILIDPPLKGIGFEYYLPATLIAQEEAEQLQAYMKTEKIPVARISPTVTILKSRPAPRVAIFSSAGPNIITPDIIKPDITAPGVNILAAWTPVPTPSTVGRSIDYNIISGTSMSCPHVTGLAAIIKSQRPHWSPAAIKSAIMTTATIMDDSVHQIGRDPERIQATPFDFGAGHINPVASLNPGLVYDFHAGDVIIFLCSVGASPAQLKNLTGQPLQCPNDPIPSYNFNYPSIGVSNLKGPVSVKRTVTYYGNGRTVYTANVIPPDGVHVTVNPSQLEFTNEGEKRSFRVEFNPLRNSNGSFVFGSLTWTNGIHRVRSPIGLNVISV* 732
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte17g00980 731 CDD Peptidases_S8_3 80 551 IPR034197 -
Pte17g00980 731 Pfam Peptidase inhibitor I9 3 78 IPR010259 -
Pte17g00980 731 Gene3D Peptidase S8/S53 domain 108 597 IPR036852 GO:0004252|GO:0006508
Pte17g00980 731 FunFam Subtilisin-like protease SBT1.5 602 729 - -
Pte17g00980 731 Pfam Subtilase family 106 554 IPR000209 GO:0006508|GO:0008236
Pte17g00980 731 Gene3D - 602 729 - -
Pte17g00980 731 Pfam Fibronectin type-III domain 631 724 IPR041469 -
Pte17g00980 731 ProSiteProfiles Serine proteases, subtilase domain profile. 86 585 - -
Pte17g00980 731 PRINTS Subtilisin serine protease family (S8) signature 514 530 IPR015500 -
Pte17g00980 731 PRINTS Subtilisin serine protease family (S8) signature 183 196 IPR015500 -
Pte17g00980 731 PRINTS Subtilisin serine protease family (S8) signature 106 125 IPR015500 -
Pte17g00980 731 Gene3D - 314 456 - -
Pte17g00980 731 FunFam Subtilisin-like protease SBT1.5 108 377 - -
Pte17g00980 731 Gene3D Peptidase S8 propeptide/proteinase inhibitor I9 1 82 IPR037045 -
Pte17g00980 731 PANTHER PROPROTEIN CONVERTASE SUBTILISIN/KEXIN 4 724 IPR045051 -
Pte17g00980 731 SUPERFAMILY Subtilisin-like 2 686 IPR036852 GO:0004252|GO:0006508
Pte17g00980 731 ProSitePatterns Serine proteases, subtilase family, serine active site. 515 525 IPR023828 -
Pte17g00980 731 Pfam PA domain 361 435 IPR003137 -
Pte17g00980 731 CDD PA_subtilisin_like 320 449 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte17g00980 Pte-Chr17 24968821 24972389 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte17g00980 4 724 Subtilisin-like Serine Gene Family AT2G04160 45.394 0.0 586
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte17g00980 - - qsa:O6P43_028512 1062.75