Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte17g00975 ATGGAGCCATGCCTAGATGAACTTACTGACGACTTTCAAAGTTTAAGCTTCACTTCCACGGCTACTACAACCACCACTACTACAGACATCAAACGCAGCACAAGCTCTGGCTCTGAGACTACACTAACCGCTGCTTCTTCCATTCACCTGAGCTCCCTCCCAACCTCTAAGCCCCACGCGCCTTCTTCCGATCCGTGCTGGGCAGCTATCCATAGGTTTCGATCCGAGTATCAAAACGGCATCATATCCCTCTCAGACCTCCACTTCTTCAGTCGACTTGGAGCAGGTGACATCGGCTCCGTCTACCTTGCTGAACTGAAATGCTGCGATGAAGGAGAAGGCACGGTTTTCTTCGCTGCCAAAGTGATGGATAAGAAAGAACTCGAGGGTCGAAGCAAGCAAGGACGGGCGAGGACAGAGAGGGAAATTCTCGAATCGCTGGACCACCCGTTCTTGCCAACTCTGTATGCTTGCATCGACGCGCCCAAATTTCTCTGTTTTTTGACCGAGTTCTGTCCCGGCGGTGACCTCCACGTGCTACGCCAACGCCAGCCCAATAAGCGCTTCCTGGAGCCCGCCGTGAGGTTCTATGCATCAGAGATCGTGGTTGCTATTGAATATCTTCACATGCTGGGAATAGTCTACCGTGATCTAAAACCTGAAAATGTTCTGGTTCGATCAGATGGTCATATTATGCTCACAGATTTTGACCTCTCCTTAAAATGTGATGAATCAACTTCCACTGCTCAATTAATTTCTGATCATCTGAACCCACTTGCAACAGCTCCAAACAAAGACTTCAAAGCTGCTGCTCCTCGTTTCGCTTCTTCTTCGTGTATCATACCCAACTGTATAGTCCCTGCAGTATCATGCTTCCACCCAAAACGCAAGCGGAAGAAGAAGCTAGGTCAACGTAGTGGTCCAGAGTTTGTTGCTGAACCAATAGACGTCCGATCCATGTCTTTTGTTGGAACCCATGAGTACTTGGCACCTGAGATAGTGTCTGGCGAGGGTCATGGCAGTGCTGTAGATTGGTGGACTTTGGGAATATTTATGTTTGAACTATTTTATGGTGTCACACCCTTTAGGGGCATGGATAATGAGTTGACCTTAGCTAACATTGTGGCTAGAGCCTTAGAGTTCCCAAAGGAACCGGCCTTGCCTACCACGGCCAAGGATCTTATCTCCCAGTTGTTGGCCAAGGACCCGGCAAGACGGCTAGGGTCCACCATGGGATCCTCGGCCGTCAAGAACCATCCATTCTTTCAAGGGGTCAATTGGGCGTTGTTAAGATGTACAACCCCACCCTTTATTCCTCCGCCATTTAGTAAAGAAGCAATGTCTGATAGTAGTTGTCCAGACACTCCCATGGATTATTATTGA 1383 0.4881 MEPCLDELTDDFQSLSFTSTATTTTTTTDIKRSTSSGSETTLTAASSIHLSSLPTSKPHAPSSDPCWAAIHRFRSEYQNGIISLSDLHFFSRLGAGDIGSVYLAELKCCDEGEGTVFFAAKVMDKKELEGRSKQGRARTEREILESLDHPFLPTLYACIDAPKFLCFLTEFCPGGDLHVLRQRQPNKRFLEPAVRFYASEIVVAIEYLHMLGIVYRDLKPENVLVRSDGHIMLTDFDLSLKCDESTSTAQLISDHLNPLATAPNKDFKAAAPRFASSSCIIPNCIVPAVSCFHPKRKRKKKLGQRSGPEFVAEPIDVRSMSFVGTHEYLAPEIVSGEGHGSAVDWWTLGIFMFELFYGVTPFRGMDNELTLANIVARALEFPKEPALPTTAKDLISQLLAKDPARRLGSTMGSSAVKNHPFFQGVNWALLRCTTPPFIPPPFSKEAMSDSSCPDTPMDYY* 461
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte17g00975 460 ProSitePatterns Serine/Threonine protein kinases active-site signature. 213 225 IPR008271 GO:0004672|GO:0006468
Pte17g00975 460 FunFam serine/threonine-protein kinase D6PK-like 176 243 - -
Pte17g00975 460 SUPERFAMILY Protein kinase-like (PK-like) 62 452 IPR011009 -
Pte17g00975 460 Gene3D Transferase(Phosphotransferase) domain 1 176 247 - -
Pte17g00975 460 SMART serkin_6 87 422 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pte17g00975 460 ProSiteProfiles Protein kinase domain profile. 87 422 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pte17g00975 460 Gene3D Transferase(Phosphotransferase) domain 1 318 440 - -
Pte17g00975 460 Pfam Protein kinase domain 89 249 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pte17g00975 460 Pfam Protein kinase domain 319 422 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pte17g00975 460 FunFam serine/threonine-protein kinase D6PK-like 317 440 - -
Pte17g00975 460 PANTHER FLIPPASE KINASE 1-RELATED 25 443 - -
Pte17g00975 460 Gene3D Phosphorylase Kinase; domain 1 85 175 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte17g00975 Pte-Chr17 24911612 24915371 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte17g00975 1 461 AGC Kinase Gene Family AT3G44610 67.660 0.0 583
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK AGC_RSK-2 Pte17g00975 Pkinase 1.8e-31 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte17g00975 K08286 - cave:132163612 719.539